Gene
| Gene Model ID | pfu_aug2.0_2797.1_25541 |
|---|---|
| Locus | scaffold2797.1 : 58619 ... 66615 : - |
| To GenomeBrowser | scaffold2797.1:58619..66615 |
| Genes list of scaffold | scaffold2797.1 |
| Synonym | pfu_aug1.0_4106.1_52182 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2797.1_25541.t1 | 2 | 1 | CUB | 44 | 144 | 2.7e-26 | 91.7 | 2.7e-14 | 2.0e-10 | 40.7 |
| pfu_aug2.0_2797.1_25541.t1 | 2 | 2 | CUB | 163 | 274 | 2.7e-26 | 91.7 | 1.2e-17 | 8.9e-14 | 51.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2797.1_25541.t1 | gi|734632639|ref|XP_010744765.1| | PREDICTED: CUB domain-containing protein 2-like [Larimichthys crocea] | 9.0e-18 |
| pfu_aug2.0_2797.1_25541.t1 | gi|736160902|ref|XP_010787968.1| | PREDICTED: CUB domain-containing protein 2 [Notothenia coriiceps] | 1.0e-17 |
| pfu_aug2.0_2797.1_25541.t1 | gi|241599043|ref|XP_002404947.1| | cubilin, putative [Ixodes scapularis] | 3.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_2797.1_25541.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2797.1_25541.t1 atgttatttgatggaaccaaatggatacagattgtttttataccacttgtattcagtattacagcttacggtcaatcgtg tactgtgccagctggaaatagaaatatcacagcttcaagacttgtgatgtcatcatttgagtcgccaaattacaaccaag gaacgggttcatatccaagtaatatggattgtggttggctaatagatactggtgacgatagtttgcagcttttattattt attacatatgatacacaatgcccagattatatttacatctatgacggtgtagatgaaactgcaactgttttagccaatgg tttatgtggaaagtcgtcctctccggcatcatattctacgtcacaacgttatgcttacgtcagaatgacgtcagatagca ctacagagaaacccggatttcatattgattacgtggcagctaatgattcttctggaaccggatgttcctccacagaaacg cttacagcgacagaatcatacagctaccttaccacaccagagtttccttcacaatacactagttctagtgattgtcgatg ggctcttagcagtggtactggggatgtagtagaaatcaccgtcatcgtatctgacgtagaggatgacaaccctaacagct gtgactatgatgtttactatatatttaatggtgcgtacaaatgcgaacataacgaaatacgaaaagtttgccaagagtat ccagcagtgttgtcttacaattatacatctaacgaggacaccgtcacagtaacgttcaaaagtgactcaagtgttaatag gagaggattcctgcttgcgtacagatcaataacgttaccgactacagcttctagtaccactgaaagtacgacagtgtcat caacatacacatcaacagcttcctctacatcaacgactgtcacttcagagtctaccactgtcaaaccaacaacttcgtca gatcctattactacaaacagtcaatcaacagattcacttacatcttatactactgtggtatgcaactgtccatcaaaccc gcctgaaaaatccactaaagatcgatcttctacagacataacagtaagtttcgaagttttccttggagcagttggtgtaa ttatttttatagttgtattcaccataacaacggcagtctgtgttgtgaaaaagaaagtaaactctcctgtaaagaagact ataacaccagttcagccatttcgagcacctgttaactcgatcaagaaacaggaagtcatagttaatgttaaaaagctttc taaacagaggaaattgcagacacagagcgggatgatcacatcggctattctgatacgtaaactgaataaagaaaacatct ccaacaaaacgacgctgcagccaccacaacaggttaccaacgcaaatgagaagaaaagggggaccgcggaacttaaaaca accatcatcattaccatgtcaatgtcaataatacggaagtga |
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Protein
| Protein ID | pfu_aug2.0_2797.1_25541.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2797.1_25541.t1 MLFDGTKWIQIVFIPLVFSITAYGQSCTVPAGNRNITASRLVMSSFESPNYNQGTGSYPSNMDCGWLIDTGDDSLQLLLF ITYDTQCPDYIYIYDGVDETATVLANGLCGKSSSPASYSTSQRYAYVRMTSDSTTEKPGFHIDYVAANDSSGTGCSSTET LTATESYSYLTTPEFPSQYTSSSDCRWALSSGTGDVVEITVIVSDVEDDNPNSCDYDVYYIFNGAYKCEHNEIRKVCQEY PAVLSYNYTSNEDTVTVTFKSDSSVNRRGFLLAYRSITLPTTASSTTESTTVSSTYTSTASSTSTTVTSESTTVKPTTSS DPITTNSQSTDSLTSYTTVVCNCPSNPPEKSTKDRSSTDITVSFEVFLGAVGVIIFIVVFTITTAVCVVKKKVNSPVKKT ITPVQPFRAPVNSIKKQEVIVNVKKLSKQRKLQTQSGMITSAILIRKLNKENISNKTTLQPPQQVTNANEKKRGTAELKT TIIITMSMSIIRK |
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