Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2734.1_15611
Locus scaffold2734.1 : 59894 ... 78335 : -
To GenomeBrowser scaffold2734.1:59894..78335
Genes list of scaffold scaffold2734.1
Synonym pfu_aug1.0_16757.1_32732

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_2734.1_15611.t1 4 1 EF-hand_4 5 86 9.9e-06 25.2 0.0076 5.6 6.7
pfu_aug2.0_2734.1_15611.t1 7 1 EF-hand_1 12 40 1.19993e-41 136.8 1.1e-11 7.9e-09 34.1
pfu_aug2.0_2734.1_15611.t1 7 1 EF-hand_6 12 41 9.4e-38 124.7 6.7e-12 5.0e-09 35.2
pfu_aug2.0_2734.1_15611.t1 8 1 EF-hand_8 12 37 2.3e-28 97.5 7.1e-05 0.053 13.1
pfu_aug2.0_2734.1_15611.t1 4 1 EF-hand_7 13 59 3.7e-40 135.8 1.7e-11 1.3e-08 34.8
pfu_aug2.0_2734.1_15611.t1 4 1 Caleosin 13 42 5.3e-06 26.0 0.0034 2.5 7.6
pfu_aug2.0_2734.1_15611.t1 5 1 EF-hand_5 14 37 8.4e-28 94.4 8.5e-10 6.3e-07 28.4
pfu_aug2.0_2734.1_15611.t1 4 1 EF-hand_9 15 57 1.7e-13 50.2 6.9e-06 0.0051 16.6
pfu_aug2.0_2734.1_15611.t1 8 2 EF-hand_8 26 60 2.3e-28 97.5 2.2e-05 0.016 14.7
pfu_aug2.0_2734.1_15611.t1 7 2 EF-hand_6 45 54 9.4e-38 124.7 7.9 5800.0 -2.3
pfu_aug2.0_2734.1_15611.t1 7 2 EF-hand_1 48 59 1.19993e-41 136.8 0.11 85.0 2.8
pfu_aug2.0_2734.1_15611.t1 4 2 EF-hand_4 59 86 9.9e-06 25.2 0.028 21.0 4.9
pfu_aug2.0_2734.1_15611.t1 7 3 EF-hand_1 61 88 1.19993e-41 136.8 1.4e-09 1.1e-06 27.5
pfu_aug2.0_2734.1_15611.t1 4 2 EF-hand_7 61 120 3.7e-40 135.8 4.2e-09 3.1e-06 27.2
pfu_aug2.0_2734.1_15611.t1 7 3 EF-hand_6 61 89 9.4e-38 124.7 3.3e-10 2.4e-07 30.0
pfu_aug2.0_2734.1_15611.t1 5 2 EF-hand_5 63 81 8.4e-28 94.4 2.4e-07 0.00018 20.6
pfu_aug2.0_2734.1_15611.t1 4 2 EF-hand_9 64 118 1.7e-13 50.2 0.015 11.0 5.9
pfu_aug2.0_2734.1_15611.t1 4 2 Caleosin 64 103 5.3e-06 26.0 0.00083 0.62 9.6
pfu_aug2.0_2734.1_15611.t1 8 3 EF-hand_8 65 80 2.3e-28 97.5 0.00017 0.13 11.9
pfu_aug2.0_2734.1_15611.t1 8 4 EF-hand_8 85 105 2.3e-28 97.5 0.28 210.0 1.6
pfu_aug2.0_2734.1_15611.t1 7 4 EF-hand_1 106 119 1.19993e-41 136.8 0.83 620.0 0.1
pfu_aug2.0_2734.1_15611.t1 7 4 EF-hand_6 107 118 9.4e-38 124.7 4.9 3700.0 -1.7
pfu_aug2.0_2734.1_15611.t1 8 5 EF-hand_8 110 158 2.3e-28 97.5 3.2e-07 0.00023 20.6
pfu_aug2.0_2734.1_15611.t1 2 1 EFhand_Ca_insen 128 158 2.7e-12 46.4 1.6e-06 0.0012 18.7
pfu_aug2.0_2734.1_15611.t1 7 5 EF-hand_1 132 159 1.19993e-41 136.8 2.7e-10 2.0e-07 29.7
pfu_aug2.0_2734.1_15611.t1 4 3 EF-hand_7 135 171 3.7e-40 135.8 1.9e-09 1.4e-06 28.3
pfu_aug2.0_2734.1_15611.t1 7 5 EF-hand_6 135 160 9.4e-38 124.7 9.1e-10 6.7e-07 28.6
pfu_aug2.0_2734.1_15611.t1 5 3 EF-hand_5 136 156 8.4e-28 94.4 2.9e-06 0.0022 17.2
pfu_aug2.0_2734.1_15611.t1 4 3 EF-hand_9 136 175 1.7e-13 50.2 0.0044 3.3 7.6
pfu_aug2.0_2734.1_15611.t1 4 3 Caleosin 138 162 5.3e-06 26.0 0.2 150.0 1.8
pfu_aug2.0_2734.1_15611.t1 8 6 EF-hand_8 145 168 2.3e-28 97.5 0.0056 4.2 7.0
pfu_aug2.0_2734.1_15611.t1 4 3 EF-hand_4 149 178 9.9e-06 25.2 3.3 2400.0 -1.8
pfu_aug2.0_2734.1_15611.t1 8 7 EF-hand_8 172 210 2.3e-28 97.5 2.6e-06 0.0019 17.7
pfu_aug2.0_2734.1_15611.t1 2 2 EFhand_Ca_insen 189 253 2.7e-12 46.4 1.8e-08 1.3e-05 25.0
pfu_aug2.0_2734.1_15611.t1 7 6 EF-hand_1 193 220 1.19993e-41 136.8 2.7e-10 2.0e-07 29.7
pfu_aug2.0_2734.1_15611.t1 4 4 EF-hand_7 196 252 3.7e-40 135.8 2.2e-15 1.6e-12 47.3
pfu_aug2.0_2734.1_15611.t1 7 6 EF-hand_6 196 221 9.4e-38 124.7 9.1e-10 6.7e-07 28.6
pfu_aug2.0_2734.1_15611.t1 5 4 EF-hand_5 197 217 8.4e-28 94.4 2.9e-06 0.0022 17.2
pfu_aug2.0_2734.1_15611.t1 4 4 EF-hand_9 197 254 1.7e-13 50.2 2.5e-05 0.018 14.9
pfu_aug2.0_2734.1_15611.t1 4 4 Caleosin 199 223 5.3e-06 26.0 0.19 140.0 1.9
pfu_aug2.0_2734.1_15611.t1 8 8 EF-hand_8 206 253 2.3e-28 97.5 1.4e-12 1.0e-09 37.8
pfu_aug2.0_2734.1_15611.t1 4 4 EF-hand_4 210 251 9.9e-06 25.2 3.6e-05 0.026 14.2
pfu_aug2.0_2734.1_15611.t1 7 7 EF-hand_1 229 254 1.19993e-41 136.8 3.2e-06 0.0024 17.0
pfu_aug2.0_2734.1_15611.t1 5 5 EF-hand_5 232 248 8.4e-28 94.4 0.019 14.0 5.1
pfu_aug2.0_2734.1_15611.t1 7 7 EF-hand_6 234 253 9.4e-38 124.7 0.23 170.0 2.5

Transcript
Transcript IDpfu_aug2.0_2734.1_15611.t1
Definition- 
>pfu_aug2.0_2734.1_15611.t1
atggcaaaacagatagctgataaagaagaagcagaatataaagaagtttttagtatgtttgataaggacggggatggaac
gataacagctaaggagctgggtaccgtgatgaggtcactaggtcgatatcctacagaggcagagctacaggatatgatca
atgaagtcgatatagacgattataaagaggcgtttagtttgtatgacagagatggggatggcgcaatttcacaaaaagaa
ttaggaatagtgatgagatcgcttgggaagaatccatccgaggcagaacttgtagcaattataatgaacgagttaaatgg
aaacgaattagttgattttcaaacattcctcaaactcattgggttagtgacaaatgaaggagatagtgaagaggaggtta
gtgaggcatttcgagtatttgataaagatggaactggatacatacacgcatcggaattacgtcaagccatgattaacctg
ggtgaaaaactgacagatgaagaagcngaattagttgattttcaaacattcctcaaactcattgggttagtgacaaatga
aggagatagtgaagaggaggttagtgaggcatttcgagtatttgataaagatggaactggatacatacacgcatcggaat
tacgtcaagccatgattaacctgggtgaaaaactgacagatgaagaagcagacgacatgcttaaaatggcggatattgat
ggagagggaaaagttgattatgaagcatttgccagacttataactggagagtaa

Protein
Protein IDpfu_aug2.0_2734.1_15611.t1
Definition- 
>pfu_aug2.0_2734.1_15611.t1
MAKQIADKEEAEYKEVFSMFDKDGDGTITAKELGTVMRSLGRYPTEAELQDMINEVDIDDYKEAFSLYDRDGDGAISQKE
LGIVMRSLGKNPSEAELVAIIMNELNGNELVDFQTFLKLIGLVTNEGDSEEEVSEAFRVFDKDGTGYIHASELRQAMINL
GEKLTDEEXELVDFQTFLKLIGLVTNEGDSEEEVSEAFRVFDKDGTGYIHASELRQAMINLGEKLTDEEADDMLKMADID
GEGKVDYEAFARLITGE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495