Gene
| Gene Model ID | pfu_aug2.0_2734.1_15608 |
|---|---|
| Locus | scaffold2734.1 : 24279 ... 38655 : - |
| To GenomeBrowser | scaffold2734.1:24279..38655 |
| Genes list of scaffold | scaffold2734.1 |
| Synonym | pfu_aug1.0_18089.1_18506 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2734.1_15608.t1 | 3 | 1 | EF-hand_4 | 4 | 38 | 1.2e-09 | 37.8 | 0.11 | 58.0 | 3.5 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 1 | EF-hand_1 | 12 | 40 | 0.0 | 163.5 | 5.0e-12 | 2.5e-09 | 35.7 |
| pfu_aug2.0_2734.1_15608.t1 | 5 | 1 | EF-hand_6 | 12 | 41 | 1.3e-39 | 130.5 | 9.6e-12 | 4.9e-09 | 35.3 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 1 | EF-hand_8 | 13 | 38 | 2.9e-34 | 116.4 | 3.0e-05 | 0.015 | 14.8 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 1 | EF-hand_7 | 14 | 59 | 2.20004e-43 | 146.2 | 7.9e-11 | 4.1e-08 | 33.2 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 1 | EF-hand_5 | 14 | 37 | 6.2e-37 | 123.3 | 4.5e-10 | 2.3e-07 | 29.8 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 1 | EF-hand_9 | 16 | 57 | 9.0e-19 | 67.1 | 1.8e-05 | 0.0093 | 15.8 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 1 | SPARC_Ca_bdg | 16 | 59 | 1.3e-11 | 44.5 | 0.014 | 7.3 | 6.6 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 1 | TerB | 25 | 60 | 8.0e-06 | 25.6 | 0.48 | 250.0 | 1.3 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 1 | UPF0154 | 28 | 57 | 3.6e-08 | 32.9 | 0.00078 | 0.4 | 10.3 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 2 | EF-hand_8 | 37 | 59 | 2.9e-34 | 116.4 | 0.0036 | 1.8 | 8.2 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 3 | EF-hand_8 | 45 | 86 | 2.9e-34 | 116.4 | 8.8e-07 | 0.00045 | 19.7 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 2 | EF-hand_1 | 48 | 59 | 0.0 | 163.5 | 0.05 | 25.0 | 4.4 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 2 | EF-hand_5 | 56 | 63 | 6.2e-37 | 123.3 | 1.4 | 730.0 | -0.2 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 2 | EF-hand_4 | 57 | 121 | 1.2e-09 | 37.8 | 1.0e-05 | 0.0053 | 16.4 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 2 | SPARC_Ca_bdg | 58 | 118 | 1.3e-11 | 44.5 | 6.6e-06 | 0.0034 | 17.4 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 3 | EF-hand_1 | 60 | 88 | 0.0 | 163.5 | 5.0e-12 | 2.5e-09 | 35.7 |
| pfu_aug2.0_2734.1_15608.t1 | 5 | 2 | EF-hand_6 | 60 | 89 | 1.3e-39 | 130.5 | 9.6e-12 | 4.9e-09 | 35.3 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 2 | EF-hand_7 | 62 | 121 | 2.20004e-43 | 146.2 | 1.1e-17 | 5.6e-15 | 55.2 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 3 | EF-hand_5 | 62 | 85 | 6.2e-37 | 123.3 | 4.5e-10 | 2.3e-07 | 29.8 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 2 | EF-hand_9 | 64 | 123 | 9.0e-19 | 67.1 | 8.6e-10 | 4.4e-07 | 29.7 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 2 | TerB | 73 | 139 | 8.0e-06 | 25.6 | 0.0049 | 2.5 | 7.8 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 2 | UPF0154 | 76 | 104 | 3.6e-08 | 32.9 | 0.00092 | 0.47 | 10.1 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 4 | EF-hand_8 | 85 | 122 | 2.9e-34 | 116.4 | 3.2e-12 | 1.6e-09 | 37.2 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 4 | EF-hand_1 | 96 | 121 | 0.0 | 163.5 | 1.8e-11 | 9.1e-09 | 33.9 |
| pfu_aug2.0_2734.1_15608.t1 | 5 | 3 | EF-hand_6 | 97 | 122 | 1.3e-39 | 130.5 | 5.5e-06 | 0.0028 | 17.3 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 4 | EF-hand_5 | 98 | 118 | 6.2e-37 | 123.3 | 7.3e-06 | 0.0037 | 16.5 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 3 | SPARC_Ca_bdg | 124 | 190 | 1.3e-11 | 44.5 | 2.7e-06 | 0.0014 | 18.6 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 5 | EF-hand_8 | 129 | 157 | 2.9e-34 | 116.4 | 8.6e-08 | 4.4e-05 | 23.0 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 5 | EF-hand_1 | 132 | 159 | 0.0 | 163.5 | 1.6e-12 | 8.0e-10 | 37.3 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 3 | EF-hand_7 | 132 | 192 | 2.20004e-43 | 146.2 | 1.4e-19 | 7.3e-17 | 61.2 |
| pfu_aug2.0_2734.1_15608.t1 | 5 | 4 | EF-hand_6 | 132 | 159 | 1.3e-39 | 130.5 | 1.8e-11 | 9.4e-09 | 34.4 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 5 | EF-hand_5 | 132 | 156 | 6.2e-37 | 123.3 | 4.1e-12 | 2.1e-09 | 36.2 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 3 | EF-hand_9 | 136 | 193 | 9.0e-19 | 67.1 | 2.9e-06 | 0.0015 | 18.4 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 3 | EF-hand_4 | 141 | 193 | 1.2e-09 | 37.8 | 9.1e-07 | 0.00047 | 19.8 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 6 | EF-hand_8 | 145 | 194 | 2.9e-34 | 116.4 | 3.1e-16 | 1.6e-13 | 50.0 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 3 | TerB | 145 | 194 | 8.0e-06 | 25.6 | 2.9e-05 | 0.015 | 15.0 |
| pfu_aug2.0_2734.1_15608.t1 | 3 | 3 | UPF0154 | 147 | 175 | 3.6e-08 | 32.9 | 0.0022 | 1.1 | 8.8 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 6 | EF-hand_1 | 167 | 194 | 0.0 | 163.5 | 5.2e-11 | 2.6e-08 | 32.5 |
| pfu_aug2.0_2734.1_15608.t1 | 5 | 5 | EF-hand_6 | 168 | 193 | 1.3e-39 | 130.5 | 5.9e-05 | 0.03 | 14.1 |
| pfu_aug2.0_2734.1_15608.t1 | 6 | 6 | EF-hand_5 | 169 | 192 | 6.2e-37 | 123.3 | 2.3e-07 | 0.00012 | 21.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2734.1_15608.t1 | gi|529444582|ref|XP_005242003.1| | PREDICTED: calmodulin [Falco peregrinus] | 0.0 |
| pfu_aug2.0_2734.1_15608.t1 | gi|543246656|ref|XP_005416368.1| | PREDICTED: calmodulin [Geospiza fortis] | 0.0 |
| pfu_aug2.0_2734.1_15608.t1 | gi|697822528|ref|XP_009647645.1| | PREDICTED: calmodulin [Egretta garzetta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2734.1_15608.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2734.1_15608.t1 atggcttcacaacattcggacgatcaaatagcagaattcaaagaagcatttagtcttttcgacaaggatggtgacggcac gatatcttcaaaagaactaggaactgttatgaggtcattaggtcagaatcccacggaaaaggagctcaaagaaatgattg cggaagtggatgcagacgaattcaaagaagcatttagtcttttcgacaaggatggtgacggcacgatatcttcaaaagaa ctaggaactgttatgaggtcattaggtcagaatcccacggaaaaggagctcaaagaaatgattgcagaagtggatgcaga tggaaacggaacaattgatttcaatgagtttttggtaatgatggatcaaagaaaagaagagacagacgattcgctacgag atgcatttaaagtttttgataaagatgggagcgggaagataagtaaagatgaactcaaacaagtaatggctactttagga gaagatttaacagatcaggaattaaacgaaatgattgaggaggcggacatgaatggcgatggtgaagttgattaccaaga attcgtaaaaatgatgcaagcgaagtcttaa |
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Protein
| Protein ID | pfu_aug2.0_2734.1_15608.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2734.1_15608.t1 MASQHSDDQIAEFKEAFSLFDKDGDGTISSKELGTVMRSLGQNPTEKELKEMIAEVDADEFKEAFSLFDKDGDGTISSKE LGTVMRSLGQNPTEKELKEMIAEVDADGNGTIDFNEFLVMMDQRKEETDDSLRDAFKVFDKDGSGKISKDELKQVMATLG EDLTDQELNEMIEEADMNGDGEVDYQEFVKMMQAKS |
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