Gene
| Gene Model ID | pfu_aug2.0_252.1_07243 |
|---|---|
| Locus | scaffold252.1 : 320028 ... 326612 : + |
| To GenomeBrowser | scaffold252.1:320028..326612 |
| Genes list of scaffold | scaffold252.1 |
| Synonym | pfu_aug1.0_13154.1_03319 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_252.1_07243.t1 | 2 | 1 | zf-B_box | 14 | 52 | 2.6e-12 | 46.4 | 2.9e-08 | 8.5e-05 | 22.3 |
| pfu_aug2.0_252.1_07243.t1 | 2 | 2 | zf-B_box | 67 | 103 | 2.6e-12 | 46.4 | 1.7e-10 | 5.2e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_252.1_07243.t1 | gi|291244525|ref|XP_002742146.1| | PREDICTED: tripartite motif-containing protein 2-like [Saccoglossus kowalevskii] | 3.0e-11 |
| pfu_aug2.0_252.1_07243.t1 | gi|260824637|ref|XP_002607274.1| | hypothetical protein BRAFLDRAFT_88222 [Branchiostoma floridae] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_252.1_07243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_252.1_07243.t1 atggccgattcagcatcgagtgatccgcattggacagtaaaatgtgacacgtgctctaagccagttgagtacttctgtaa tacatgtggagagcgtatgtgctctaattctcgtgagtatcacctcaaaagccgtgcgtcctcagaccataatgttgtgt tgttctacgacaaagcagagtcgcttatcaaatcgttgtcccactgcaaggatcacccaagccaaaagtatcagctctgg tgcgagccttgtgagacagcagtgtgtatcaaatgtacaacaaacaatcactacacgcatagatttcttgagctgaacac aatatacgacacaaagagaaaggcaatcatcgattctttgcatgaccttcgaaacgaggttttaccaaagtggaacaaac ggcaagtggaagtcggtaattcaattctggaatatcaacgaaatgtgcaaaacttggacaaggagttaattcaagaggga gagaaactgaaatcacgaatagatgaaagcgtgactgcaagaagaaaggaactccaacaaaagtgttcgcttgtcgtcag aaatctcagtattgaggagcagagttgtcgaaaggaaattctgaatgtgagagaggtcattgctgaatttgaagatcgtc tgaggcatgaagatcaaatgacaaccattcattttgacctcagtcgtacaaagtaccaagaagtcgcgcatcttccagaa ctccccaaacaaaatctgccaagattgataggaggcgatctggaaaaggaagattttgagaaaatttttcggaacctggc tatttctgaatcagaactatggaaagaaaccaccgggacgaaaaaacctttgtttcagcaggaattgtatcaaagagttc catccccagcacaattggcaagacccacacagaagtttacccaggatcccgacctcctcatagaacatgttctagtaagc aaagtaaagaccacagctcaatctcccagtgttggatgcctgagctcgcggagagcgtggatggaaacgaaaccaaatat cacaagtatggtagatatacagggtaacattcttcactctgtgagcatgccgccatctagcttcactatatcgcgctcag aacacatagttgccattagttatgatgagaaaatggtcacagagataacaaaggcagatgagcgtagacctctatttgct ctaccatatagaccaaccgggatctgttctaccccagagaatgtcgtcgtcgcattccatgaagcacatgagacggtggt gtatgactggaatggtgagtcggtcacaaaatacacatctgtgagatacccgtacaaagtgacagtcaataaagtgacaa aggatatctgcatcagcagcaaaccagatttaagtgtaccaggttgcataggcatagtggttgctctgaggaaatctgga ggcactcatttcgaatataaaggttcagatccagaccatttcagtccagtagagctgtgttcagacccgggaggacgcgt tctcgtcgctgactgtggcagcaataacgtccacattattgatcgtgatggaggattcctgacatatctttttattcatc aggagacattccacattcctatgaccatagactgtgatagagagggacaagtctgggcgggagagatggatgggacaatg aagatcgtgaagtacttgaacatgtaa |
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Protein
| Protein ID | pfu_aug2.0_252.1_07243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_252.1_07243.t1 MADSASSDPHWTVKCDTCSKPVEYFCNTCGERMCSNSREYHLKSRASSDHNVVLFYDKAESLIKSLSHCKDHPSQKYQLW CEPCETAVCIKCTTNNHYTHRFLELNTIYDTKRKAIIDSLHDLRNEVLPKWNKRQVEVGNSILEYQRNVQNLDKELIQEG EKLKSRIDESVTARRKELQQKCSLVVRNLSIEEQSCRKEILNVREVIAEFEDRLRHEDQMTTIHFDLSRTKYQEVAHLPE LPKQNLPRLIGGDLEKEDFEKIFRNLAISESELWKETTGTKKPLFQQELYQRVPSPAQLARPTQKFTQDPDLLIEHVLVS KVKTTAQSPSVGCLSSRRAWMETKPNITSMVDIQGNILHSVSMPPSSFTISRSEHIVAISYDEKMVTEITKADERRPLFA LPYRPTGICSTPENVVVAFHEAHETVVYDWNGESVTKYTSVRYPYKVTVNKVTKDICISSKPDLSVPGCIGIVVALRKSG GTHFEYKGSDPDHFSPVELCSDPGGRVLVADCGSNNVHIIDRDGGFLTYLFIHQETFHIPMTIDCDREGQVWAGEMDGTM KIVKYLNM |
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