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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_252.1_07242
Locus scaffold252.1 : 304008 ... 317005 : +
To GenomeBrowser scaffold252.1:304008..317005
Genes list of scaffold scaffold252.1
Synonym pfu_aug1.0_6828.1_02310

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_252.1_07242.t1 gi|731290821|ref|XP_010613440.1| PREDICTED: Hermansky-Pudlak syndrome 5 protein isoform X3 [Fukomys damarensis] 5.0e-13
pfu_aug2.0_252.1_07242.t1 gi|426367693|ref|XP_004050861.1| PREDICTED: Hermansky-Pudlak syndrome 5 protein [Gorilla gorilla gorilla] 3.0e-12

Transcript
Transcript IDpfu_aug2.0_252.1_07242.t1
Definition-
>pfu_aug2.0_252.1_07242.t1
atggatggcgaactgcgtaaaaatgtctcagagctcactcaaatgtgcttctctgttaatacatatggtgcaatatcaga
atttttaagtatcggtgctaagcattccagaacacaatatacagaacaatgttctttagatagtaccttacacttgaatc
attctcatataaccaaaaatactgatgttgatattgaacttaaatcatcagtagaaacacagacacagcgtgataagcag
agtgatgtgaagtcggaatcagaattaaacagaggtggcaaaactcagagcggggatgatgaaactagctcgttacatca
tgctccgacagaaagtgatttacctgaatccttgtcagacttggaggagattttgttcattcgttgctatttctttttgc
tcaatgtagaggacattcaggatcagatttataaaaatgagatttgggatcaatccggtgaaacaaaaaatttctacatc
tggagaaccttattagaatgcttacaagagagatgcaagagagatataatatgtgataagatatcgggaaaggatataaa
agatgccttggacatgctgaagtcaggactgtataatcgggaaaactctctaggttacttgtcaacgttatttgaggtag
atccttcagcagcgatggattttgcagtcgactgtcgtcatattgagccgttggacatcttacatctgtgcgtacattac
aacatgcctaccaaagtccatctacatcagtatatgtgttcattgtataggaattcatctaaactactgctgaccaggca
gccacattgttcaagagttgtatatcctgttaccaaggagtggttacagattctgctaactatggactgtgataggacgg
tgctgtctgatactcagggaaatccaagttattggattggttgcttagcaatgttgaagaacctcaagaaatatgatgac
atgttgaaggttatatatcaccttggagatatcagtcttgtatcccatgaatattacctcccttgttcagaggaagagtg
gattcattttgtgagtgaatacagtaaattttgtgaccagcggagaaagtttactaaaacaagtgaaggttcagtgaaca
gagacatacatgatacagaacatgatgtatcacagaaacctggatcaggtgtcacagacttgtctgtatgtcaggatggc
tgtatgtcctggatcaatgttgccgatttaatcgtacagaaattaggtgtaatgaaaagtgtgaagatactgggacagtt
tacaggagaaatggatggactgtcaacaaagttttatcagaaagttctgacatcagcaatgattgaaaaacatcaaagga
atgttagtcacaatctggtggagaagattgattcttatttgtgggcacaaaaacctaattcttttatgcctcagttgcag
tacgctatttctacagagaaactgtcaggaagatcagaccaagatgtccaatccattcaggatataaaaatgacattgag
aaatgattccatggaggtacataggtacagggaagattatgaatgtcactggggagttgttacacaaatgtcaaagatca
ggggatctccaacaacactaggttgcagcacctacagcaaaactccagaacacccaatgaaaaacacagagcagacacac
acagaaagagacacaaaaggaacaaggagcaccaacatagaaacatcaaacacaaaggaccacacataa

Protein
Protein IDpfu_aug2.0_252.1_07242.t1
Definition-
>pfu_aug2.0_252.1_07242.t1
MDGELRKNVSELTQMCFSVNTYGAISEFLSIGAKHSRTQYTEQCSLDSTLHLNHSHITKNTDVDIELKSSVETQTQRDKQ
SDVKSESELNRGGKTQSGDDETSSLHHAPTESDLPESLSDLEEILFIRCYFFLLNVEDIQDQIYKNEIWDQSGETKNFYI
WRTLLECLQERCKRDIICDKISGKDIKDALDMLKSGLYNRENSLGYLSTLFEVDPSAAMDFAVDCRHIEPLDILHLCVHY
NMPTKVHLHQYMCSLYRNSSKLLLTRQPHCSRVVYPVTKEWLQILLTMDCDRTVLSDTQGNPSYWIGCLAMLKNLKKYDD
MLKVIYHLGDISLVSHEYYLPCSEEEWIHFVSEYSKFCDQRRKFTKTSEGSVNRDIHDTEHDVSQKPGSGVTDLSVCQDG
CMSWINVADLIVQKLGVMKSVKILGQFTGEMDGLSTKFYQKVLTSAMIEKHQRNVSHNLVEKIDSYLWAQKPNSFMPQLQ
YAISTEKLSGRSDQDVQSIQDIKMTLRNDSMEVHRYREDYECHWGVVTQMSKIRGSPTTLGCSTYSKTPEHPMKNTEQTH
TERDTKGTRSTNIETSNTKDHT

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