Gene
| Gene Model ID | pfu_aug2.0_252.1_07233 |
|---|---|
| Locus | scaffold252.1 : 196832 ... 198057 : - |
| To GenomeBrowser | scaffold252.1:196832..198057 |
| Genes list of scaffold | scaffold252.1 |
| Synonym | pfu_aug1.0_5277.1_38108 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_252.1_07233.t1 | 1 | 1 | 7tm_1 | 41 | 298 | 3.0e-16 | 59.3 | 4.9e-20 | 3.6e-16 | 59.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_252.1_07233.t1 | gi|556970786|ref|XP_005993913.1| | PREDICTED: lysophosphatidic acid receptor 3 [Latimeria chalumnae] | 5.0e-08 |
| pfu_aug2.0_252.1_07233.t1 | gi|734649931|ref|XP_010754272.1| | PREDICTED: sphingosine 1-phosphate receptor 1 [Larimichthys crocea] | 2.0e-06 |
| pfu_aug2.0_252.1_07233.t1 | gi|591383401|ref|XP_007066162.1| | PREDICTED: 5-hydroxytryptamine receptor 1D [Chelonia mydas] | 2.0e-06 |
| pfu_aug2.0_252.1_07233.t1 | gi|617453687|ref|XP_007569504.1| | PREDICTED: sphingosine 1-phosphate receptor 1 [Poecilia formosa] | 6.0e-06 |
| pfu_aug2.0_252.1_07233.t1 | gi|742102404|ref|XP_010869664.1| | PREDICTED: sphingosine 1-phosphate receptor 1 [Esox lucius] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_252.1_07233.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_252.1_07233.t1 atgaattcatcagcgaatacctctcacgaggacgtagatgacagtgaacatattaatgctggaataagaaaggtaatttt tgctttttcgggttccatttcgctgcttgcactttgccttaatttccttatggtcacagcgctgattaggagcaaagagc tacgaaaacgccggtaccctacactagtcttgtgtctaggatttggtgatggcttggtatctataggtgccattctgtgg ttgattaaccagatcacaggctcaggatcctcaatttcgtgtggaatatccatgtgcctcctcacagttggcgtctttat gtctgtgcacgtcactttcatcatatgcttgaatcggtatttgacaaccttgaggtcccacatggcagacaagttgtacg gcacctacagaaagtttctccttatcttcgtcccaagtaccgttattacaatcttaactatggcgtccagtttgctttgg gaggaggaggtagcttcctgtagtattgccaacgtgtttggggaccagatgccggtctacagtattttcctgacggctat ttacctacccaccttatttgcaactgtagttgtgtacgttttaactactagagtggtcattcgtcagtttggtaggattg atgcatcggaagcaaacatatcaacaattcttcaacaaaacaatgaacattttacgctgcctgactcctcgaggaaaaga aaaatgacagttctgaagacggtgggacttatattggcttgccttttgtttttgactacgccattagtaatatcgtttcc cttgatgctgcttaacgtatccatcaatcaaacagtccgggtttgtttcacttggggtgtgactattaactccgccatta accctatcatatacacttgcagaatagaggaaataaggaaagaccttaagaaaactgtgctctgtttttacaagaaagac tga |
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Protein
| Protein ID | pfu_aug2.0_252.1_07233.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_252.1_07233.t1 MNSSANTSHEDVDDSEHINAGIRKVIFAFSGSISLLALCLNFLMVTALIRSKELRKRRYPTLVLCLGFGDGLVSIGAILW LINQITGSGSSISCGISMCLLTVGVFMSVHVTFIICLNRYLTTLRSHMADKLYGTYRKFLLIFVPSTVITILTMASSLLW EEEVASCSIANVFGDQMPVYSIFLTAIYLPTLFATVVVYVLTTRVVIRQFGRIDASEANISTILQQNNEHFTLPDSSRKR KMTVLKTVGLILACLLFLTTPLVISFPLMLLNVSINQTVRVCFTWGVTINSAINPIIYTCRIEEIRKDLKKTVLCFYKKD |
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