Gene
| Gene Model ID | pfu_aug2.0_252.1_07232 |
|---|---|
| Locus | scaffold252.1 : 146976 ... 191273 : + |
| To GenomeBrowser | scaffold252.1:146976..191273 |
| Genes list of scaffold | scaffold252.1 |
| Synonym | pfu_aug1.0_26143.1_04501 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_252.1_07232.t1 | 2 | 1 | BEN | 359 | 428 | 1.2e-15 | 57.2 | 9.5e-12 | 4.7e-08 | 32.9 |
| pfu_aug2.0_252.1_07232.t1 | 2 | 2 | BEN | 705 | 782 | 1.2e-15 | 57.2 | 3.4e-08 | 0.00017 | 21.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_252.1_07232.t1 | gi|632962392|ref|XP_007897289.1| | PREDICTED: BEN domain-containing protein 3 isoform X1 [Callorhinchus milii] | 6.0e-15 |
| pfu_aug2.0_252.1_07232.t1 | gi|632962400|ref|XP_007897293.1| | PREDICTED: BEN domain-containing protein 3 isoform X2 [Callorhinchus milii] | 7.0e-15 |
| pfu_aug2.0_252.1_07232.t1 | gi|632962402|ref|XP_007897294.1| | PREDICTED: BEN domain-containing protein 3 isoform X3 [Callorhinchus milii] | 8.0e-15 |
| pfu_aug2.0_252.1_07232.t1 | gi|663244218|ref|XP_008502228.1| | PREDICTED: BEN domain-containing protein 3 [Calypte anna] | 1.0e-14 |
| pfu_aug2.0_252.1_07232.t1 | gi|699705200|ref|XP_009892161.1| | PREDICTED: BEN domain-containing protein 3 [Charadrius vociferus] | 1.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_252.1_07232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_252.1_07232.t1 atgacattctcaatatcaaggccaagtacaggtgagaaggatttacgtgttgtgaacataccagcatctgcagcagaatc acagccctcaacagcagcatcaaacagccatacatctactgctgccgctccatctttatcaaaagttggagaaaatatat caccaagtttacatacagatagatctaggtcagcatctccagtacagttactcgctgccaaaccttcaacagttggttct caaggtaaatcgtttgccgcaggaagtgctgagcaggcagtggcatcacaaaggtcatgtgaccagggaaccatgggcac ggagctggaacctgacaagtccacaatgtcaaatagaacgtccaagcagagggagagtccacatataccggaggggaaga caggaactggtacagataggagtggatctcaaggtcaaagcagacaacaagtattgttgctacagttagaaccagaaaat gatttgtttttagaaaatcagccgcatagtgattcttcacgaatatctactttcctgagttcttccacagtattcacaga agttgagaaaaacaggaaatcagacagagggaaatcactacccctcacaaggcctgctgtatcaacagacagtaagggat tagatgtgcagacttctgacttgatagggaaatcattaactctcttgaattcgctaccaatgaccttggaaaatcctaca ttgaaaggtgcatctgaaatagtagagtcaaatttgagtgaaaccgaaagttcgaacagagtgtataatgtttccgaaac tgcaagcaatcgccaagaaaaggagtcaacacaatcggcaaatgaaagtaaaaaactcatggatgtacttggaaaaatag acaaaaaactggagtttctaagcagacgagtgactgctatagaggtggaaaagaaacaaggaaatgacgctgccagtaca acatatcttcaatatgtcccggatgtaccgtcaaccacagaaattccagaaaaatatcgcaccgatatggaaacgcttaa agacattgagagaaatgcgaagcaaaatccaggaaactttgctttgaaattaacccaaagattcttccctgaactctttg gtccagattgtctcaggaagaaatttaattggtatggttcactgaataaaaagagactggacccagtcaggtgtaacgtc atcagacattacgtcagcatcttttatccggaaataaatgatgaaaatattttcaaaagaacagtcgtacttggtgtgaa tgagggactcagaagatataaggtgaaggcaaatattgctaatttagaaacaccttttttggaccttaatatcaaaattg ttaatgtagagattcatacaagtgtgtatgacagaggagatgattttggattcaacattataaaatttccctggcttgac ggtgatgttcctagattaccgtcaaacggtgtctacatttcacagcttatccggtatgctagagcatgaccctcggatga caggagttatcaaggccgctgcagtgaaactcctcaccgtacagtctcctcgtttttaagttcgtcaactttatttaccg agtgtagtcatctgttcaaaaaccccaaaggttcgtctgctgtatctggaatgaaatccgttccatcgactttatccgta aacagtggagcaaccgaaagacaaactttcatacaatctacctcgacggccgcaaaatctacaaccccaaatgccacaag tgctgatgacgtaagtgcttactccgttattccctctgatgctattcttgaagaagttacttcagtggaaacaaattcta ggtccatgacaaagccgacatcaacagatggtcatattttcagtctactcagtaaaatggacaaaaagttgagtttctta agtaaacgtgtcgcagctgtagagggtactatgggaaaagatggagaaggtcccttctccgaatatgaacagatctattc agaggttgatgaaagaccaaagagtgtaaattacagcagcatacctgatgagtatcggctgtcaatgaaagaactggagg caattgatgaaacaacaacagggaatgctgggaattttgctctgaagttggtgaaacgtttctttcctgaattgtatggt ccagataaccagagattcgagtacaactggttaggaagttccattaaaaagacactggatcctgtcaggaagaacgtaat acgatattacgtcagttgtttatatccagaagtgaacgatgaacgtttattcaggaaaattgtcattcacgcggtgaatg agggacttaggcgtcctttgtataagaaaagccgtctagcaaagaaggaatctaacctttacaggggaaactatcagtaa |
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Protein
| Protein ID | pfu_aug2.0_252.1_07232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_252.1_07232.t1 MTFSISRPSTGEKDLRVVNIPASAAESQPSTAASNSHTSTAAAPSLSKVGENISPSLHTDRSRSASPVQLLAAKPSTVGS QGKSFAAGSAEQAVASQRSCDQGTMGTELEPDKSTMSNRTSKQRESPHIPEGKTGTGTDRSGSQGQSRQQVLLLQLEPEN DLFLENQPHSDSSRISTFLSSSTVFTEVEKNRKSDRGKSLPLTRPAVSTDSKGLDVQTSDLIGKSLTLLNSLPMTLENPT LKGASEIVESNLSETESSNRVYNVSETASNRQEKESTQSANESKKLMDVLGKIDKKLEFLSRRVTAIEVEKKQGNDAAST TYLQYVPDVPSTTEIPEKYRTDMETLKDIERNAKQNPGNFALKLTQRFFPELFGPDCLRKKFNWYGSLNKKRLDPVRCNV IRHYVSIFYPEINDENIFKRTVVLGVNEGLRRYKVKANIANLETPFLDLNIKIVNVEIHTSVYDRGDDFGFNIIKFPWLD GDVPRLPSNGVYISQLIRYARAXPSDDRSYQGRCSETPHRTVSSFLSSSTLFTECSHLFKNPKGSSAVSGMKSVPSTLSV NSGATERQTFIQSTSTAAKSTTPNATSADDVSAYSVIPSDAILEEVTSVETNSRSMTKPTSTDGHIFSLLSKMDKKLSFL SKRVAAVEGTMGKDGEGPFSEYEQIYSEVDERPKSVNYSSIPDEYRLSMKELEAIDETTTGNAGNFALKLVKRFFPELYG PDNQRFEYNWLGSSIKKTLDPVRKNVIRYYVSCLYPEVNDERLFRKIVIHAVNEGLRRPLYKKSRLAKKESNLYRGNYQ |
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