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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_252.1_07227
Locus scaffold252.1 : 60124 ... 64005 : -
To GenomeBrowser scaffold252.1:60124..64005
Genes list of scaffold scaffold252.1
Synonym pfu_aug1.0_41435.1_48449

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_252.1_07227.t1 1 1 Galactosyl_T 131 316 4.10006e-41 140.7 2.94273e-44 7.00005e-41 139.9

Transcript
Transcript IDpfu_aug2.0_252.1_07227.t1
Definition-
>pfu_aug2.0_252.1_07227.t1
atgatatttgtatatatacaatcaagcgctcccaaaacagatatcaaagaacagaaagaagactatcctttcgtgagcga
tgaaactattactcgcttagacaaaggtaactacacacccagtggattgataaaattgcttgatcctgaaaagaaatgga
tacgataccaaccgatatcctttgatgaccagtttcgatacccagccgaagtagacatggtggaattaaccgagaatctc
ttaaagggtcgaaaaagcaatgtccatccaactaatgaacatccattcaggtatttgaataatcctgaaaaattgtgttc
cacagaatcaaataatagtgatattgatttgcttatcctcgtaaaatcgtcgactcaatattacacactacggcgtgtca
ttcgaaaaacatggggaaaagacttgaaaaagagaggaaagtacaaactggcattcttgcttggacaatctaataattat
cagcaacattatataaatttggaacataaggaaaatcatgacattatccaacaggatttcatagacaactacgtgaataa
tacatataaaaccgtcatggcgtacaactgggcctctcagtattgttctaatgcacggactgtcttatttctagatgatg
atatgtttttgaattccgtcaaattggaaaaacatatatctgaatttgttgatgacagcaatcatgtcttattcacggga
agattggcaggtagaagcaaacccatccgcaatcaaaaatcaaaatggttcatgccatggcacgaatatccttacgattt
ttatccaaaatatttggctggttccgcaatatttgcatctatgcatgttgtaaaacgattccacgctgcctttccgtata
tcaggcattttggagtagacgatgtctatcttggtatagtggcccataagttaaatatcacacctacaaaagctttatat
atagacaacgataatttgcgaaatttcaaaaaattaccttatcttatagcaaaccacggttttagagacttcaagttgta
tcataaaacatacttgaatttaacttcattcagaagaagaacggcttgtacataccgggaaagtacacatttagagctgt
ga

Protein
Protein IDpfu_aug2.0_252.1_07227.t1
Definition-
>pfu_aug2.0_252.1_07227.t1
MIFVYIQSSAPKTDIKEQKEDYPFVSDETITRLDKGNYTPSGLIKLLDPEKKWIRYQPISFDDQFRYPAEVDMVELTENL
LKGRKSNVHPTNEHPFRYLNNPEKLCSTESNNSDIDLLILVKSSTQYYTLRRVIRKTWGKDLKKRGKYKLAFLLGQSNNY
QQHYINLEHKENHDIIQQDFIDNYVNNTYKTVMAYNWASQYCSNARTVLFLDDDMFLNSVKLEKHISEFVDDSNHVLFTG
RLAGRSKPIRNQKSKWFMPWHEYPYDFYPKYLAGSAIFASMHVVKRFHAAFPYIRHFGVDDVYLGIVAHKLNITPTKALY
IDNDNLRNFKKLPYLIANHGFRDFKLYHKTYLNLTSFRRRTACTYRESTHLEL

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