Gene
| Gene Model ID | pfu_aug2.0_2511.1_05562 |
|---|---|
| Locus | scaffold2511.1 : 15311 ... 50065 : - |
| To GenomeBrowser | scaffold2511.1:15311..50065 |
| Genes list of scaffold | scaffold2511.1 |
| Synonym | pfu_aug1.0_2468.1_01112 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2511.1_05562.t1 | 2 | 1 | zf-B_box | 919 | 953 | 8.6e-09 | 35.1 | 2.3e-12 | 8.6e-09 | 35.1 |
| pfu_aug2.0_2511.1_05562.t1 | 2 | 2 | zf-B_box | 1355 | 1360 | 8.6e-09 | 35.1 | 4.0 | 15000.0 | -4.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2511.1_05562.t1 | gi|585666307|ref|XP_006817081.1| | PREDICTED: probable GPI-anchored adhesin-like protein PGA55-like [Saccoglossus kowalevskii] | 7.0e-12 |
| pfu_aug2.0_2511.1_05562.t1 | gi|585644975|ref|XP_006811481.1| | PREDICTED: circumsporozoite protein-like, partial [Saccoglossus kowalevskii] | 8.0e-11 |
| pfu_aug2.0_2511.1_05562.t1 | gi|260826079|ref|XP_002607993.1| | hypothetical protein BRAFLDRAFT_213530 [Branchiostoma floridae] | 2.0e-10 |
| pfu_aug2.0_2511.1_05562.t1 | gi|156322286|ref|XP_001618322.1| | hypothetical protein NEMVEDRAFT_v1g48854 [Nematostella vectensis] | 3.0e-07 |
| pfu_aug2.0_2511.1_05562.t1 | gi|260823236|ref|XP_002604089.1| | hypothetical protein BRAFLDRAFT_71622 [Branchiostoma floridae] | 6.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_2511.1_05562.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2511.1_05562.t1 atgcagtgtaaggatgccatatctgaatgcagagaaattcgatcaaatcagcttccgcctttaaaaaatgaaatagatcg atacgagaagaaaatacaagaacaagacgcctgtctcgaacaaaatgaatctgctttaaatggtccccggaaaatgtaca tcgataaaatcaacaaattatatgatgtaagattagaggaatgtcgtcaaaagaccgaggcgtcaaaacaaaaatgtatg aaagaacgcgacggattgaaatcgaaagtaaaatacttggatatgattacaacgtccttagacaaggatatcaatacatt gcccgaccatgatattctggacatggagaaagagatgaggaatgaattggaaaaggctctctcttatagcgccgataaaa acacatgtacaaagtttgtcccaatgcagattaatgccaaggcatgggagaaaatgattgatgaaatccaccttgtctct gtggaagaggagaacgacatcgaagtatcttctggaattgtagaaggaataaaacctacatccgataaaaatgtttggat caaatttgagaaccaagcaatattgactggtacatcaggaaatctattgagaagaattgatacttgttgttcagatttta tcatctcggataatggaaatgtaataatggtctttttagaagagaagattattgttgttcgcagtgaagaaaacgaacag aaaatagcagaatttcacaccgaaccatttcatcctatcaaagtcagtaaaacggacaatgatgaaatcctcgtgatatt acgagacaatgaatatagtcatctacctacaagccgccgtatggttcgacgtatgactctcactgggaaggtgcttcata cgtacgaattcagagaggatggtaagacaaggctgttccattgtccgctaagcacaatagagaacaagaacactgatgtg tgtataataaactggctaaatgatgtttctggtgaaatagtcatcctgcataaagatggacgagtaaagtcaacgtttgg gctgtatggatggaatgtaaacgagttcaaaccactagacattgagtgtgactcgaaatcgaacatactatttacgaaac tatacagtagagcagtctacatgctgaatgcagatggacaatatttgtgcaaactacttcagtttgaggttaaacttgtc gctgccgtagccattcttagtgatcgtctttggtgcggattcctcaatggcagagtgaaaattctcaatatacgcgggtc aagcgtaatcgtaacaataagggaacaaagtgaacctggaacaataagggaacaaagtgaacctgtaacaataagggaac aaagtgaacctgtaacaataagggaacaaagtgaacctgtaacaataagggaacaaagtgaacctgtaacaataagggaa caaagtgaacctgtaacaataagggaacaaagtgaacctgtaacaacaagggaacaaagtgaacctgtaacaataagaga acaaagtgaacctatcattattttgaagataaaaaaaaagagtaccttctgtcagagttccatcttctcaagacaagcat acgtaatactttactccccgttgtcggatgtcatacataaaactgtgtctgcggcgagtgtcgtagtgtcgccgtttggt tcaatgtatgacgatggcgatgtgctccacatatacgagttgagagaggatgacaagacaagattatttactcttcctat gttagctgtggaaaacaagaacaatgatgttagtcacatacttaaagagaaaagacacagtttaccagaggaatgtagaa aaattcgtgcgactcaacttccatgtttaagaaacgaattagatcgattcgaagaaaaaatacaagagcaagatgctcgt tttgaacaaaacaaatctgctttgaatggttcgcggaagagctacatcgatgaaatcaacaaattgtttgatgggaaaat agacgaatgtcgtaataataccgcgatagctaaacaaatatatttagacgaacgtgaaggacttaaaaggaaagtagaat atctggacatgattaccacgtccttagacaaggatatcaatactttgcctgaccatgatattctggacatggagaaggag atgagggatgaactggaaagggttctcttttacagtgctgataagtacacgtgctctacagtatttgttcccgggcagat tattgtagagactctaacggacatgataggtgagttccacttcgtgtctgtggaggaacaaaatgatatttacaaatatc ctaatggtatagagactgttaaacctatatctgaaacatatgcttggatcatgaccgaggtcgacgaccatccaaaactg attgatagaacagggacactatctagaataatgccagttagttgtacggatcttatcatatcagacaaaggaaacatcgt tcttacatcttcgaacaaagacatcgtttcagttctcacacaagaaggacagatgataacagagttcaacactaaaccat tatatcctgcgtggatcagtaaaacacagaaagatgaactcctagtcacaatgtgggacaaaggtgacgaatttgacttg gtatcatctagccgacgtgtcgttcagcgtttgactctcacaggcgatgtgctccagacatacgagttcatggacgatgg ccagacaagtttatacaaggctcaatgtgctcttagactttgtgaaaagcacgacaaaaaggagattaatgcgtactgta agacatgtcaggaaaaagtatgttcatcatgtattaaggaggaccataattcacatgactgggacatgatcgcagattta cttagggagaaaaaacacactttacctgaggagtgtaaagaaattcgtgctacacaacttccgtatttgagaaacgaaat agatcgactcgaagataaaatacaggaacaagatgctctttttgaacaagacaaatcagcgataaatgaaacccgaaaaa gctatattgatgaaatcaataaattgttcaatgggaggattgacgaatgtcgtaaaaattccgagatatcaaaacgaaaa tttaaggatgaacgcgacggattgaaaatgaaagtagaatacctggatatgattacaacatccttagacaaagagattac tactttacccaaccatgacattctggacatggagatggagatgagaaaagaacttaaaaaggctttctcttacagtgctg ataaggacacatgtaccactgggtttgtacccaggaagattaatgtggagacaatgaagaaaatgataggtgaattccat tccgtgtctgttgaagaactacatgatataggtccgtattccgaatccatacaaacaataaaacctgtttctgacacaga ggcctggatgatccgtgaagataattatccagaattaattgataggaatgggacgcaaataaaagatattcaaacgaagt gtaaagaccttataatctctgaacaaggaaatatcgtgctgacgtcatcaagatcccgaattttgattctcgatcaaaac gggaaaaagaaaataaccgaatttaatacaaaaccattaaggcccactttgattagtaaaacagagaacgacgaaatcct tgtaacactgcgggaaaagggtgacgactacaatcttcttcctaccagccgccgagtggttcagcgtatgacactcgcag gagatgtgctcaacacgtacgagttcacggaggatggcaagacaagattatttactctgcctatgacaacggcagaaaac aagaacaatgacgtatgtatcgtcaattggatcagtgatgtcagcggagaactagtagtactatacaaagatggacgtca gaagtttacgtatagaggagaagggctgaatattgaaaacttcctacctacagatgttgcatgcgattcaaaatgtaata tcatcttctcagaagcaaagaacaattttaatgcaatccatatactgggtgcagatgggatatttctatgcacattatgt cagtgtggacagttttttccctatgtaatcgccgtctacagtgataaaatttggtgtgggtttggtcaaggcagagtgaa agtttatagatatcacataaattga |
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Protein
| Protein ID | pfu_aug2.0_2511.1_05562.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2511.1_05562.t1 MQCKDAISECREIRSNQLPPLKNEIDRYEKKIQEQDACLEQNESALNGPRKMYIDKINKLYDVRLEECRQKTEASKQKCM KERDGLKSKVKYLDMITTSLDKDINTLPDHDILDMEKEMRNELEKALSYSADKNTCTKFVPMQINAKAWEKMIDEIHLVS VEEENDIEVSSGIVEGIKPTSDKNVWIKFENQAILTGTSGNLLRRIDTCCSDFIISDNGNVIMVFLEEKIIVVRSEENEQ KIAEFHTEPFHPIKVSKTDNDEILVILRDNEYSHLPTSRRMVRRMTLTGKVLHTYEFREDGKTRLFHCPLSTIENKNTDV CIINWLNDVSGEIVILHKDGRVKSTFGLYGWNVNEFKPLDIECDSKSNILFTKLYSRAVYMLNADGQYLCKLLQFEVKLV AAVAILSDRLWCGFLNGRVKILNIRGSSVIVTIREQSEPGTIREQSEPVTIREQSEPVTIREQSEPVTIREQSEPVTIRE QSEPVTIREQSEPVTTREQSEPVTIREQSEPIIILKIKKKSTFCQSSIFSRQAYVILYSPLSDVIHKTVSAASVVVSPFG SMYDDGDVLHIYELREDDKTRLFTLPMLAVENKNNDVSHILKEKRHSLPEECRKIRATQLPCLRNELDRFEEKIQEQDAR FEQNKSALNGSRKSYIDEINKLFDGKIDECRNNTAIAKQIYLDEREGLKRKVEYLDMITTSLDKDINTLPDHDILDMEKE MRDELERVLFYSADKYTCSTVFVPGQIIVETLTDMIGEFHFVSVEEQNDIYKYPNGIETVKPISETYAWIMTEVDDHPKL IDRTGTLSRIMPVSCTDLIISDKGNIVLTSSNKDIVSVLTQEGQMITEFNTKPLYPAWISKTQKDELLVTMWDKGDEFDL VSSSRRVVQRLTLTGDVLQTYEFMDDGQTSLYKAQCALRLCEKHDKKEINAYCKTCQEKVCSSCIKEDHNSHDWDMIADL LREKKHTLPEECKEIRATQLPYLRNEIDRLEDKIQEQDALFEQDKSAINETRKSYIDEINKLFNGRIDECRKNSEISKRK FKDERDGLKMKVEYLDMITTSLDKEITTLPNHDILDMEMEMRKELKKAFSYSADKDTCTTGFVPRKINVETMKKMIGEFH SVSVEELHDIGPYSESIQTIKPVSDTEAWMIREDNYPELIDRNGTQIKDIQTKCKDLIISEQGNIVLTSSRSRILILDQN GKKKITEFNTKPLRPTLISKTENDEILVTLREKGDDYNLLPTSRRVVQRMTLAGDVLNTYEFTEDGKTRLFTLPMTTAEN KNNDVCIVNWISDVSGELVVLYKDGRQKFTYRGEGLNIENFLPTDVACDSKCNIIFSEAKNNFNAIHILGADGIFLCTLC QCGQFFPYVIAVYSDKIWCGFGQGRVKVYRYHIN |
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