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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2481.1_05550
Locus scaffold2481.1 : 7026 ... 35678 : +
To GenomeBrowser scaffold2481.1:7026..35678
Genes list of scaffold scaffold2481.1
Synonym pfu_aug1.0_4770.1_52367

Manual annotation
Transcript
Transcript IDpfu_aug2.0_2481.1_05550.t1
Definition-
>pfu_aug2.0_2481.1_05550.t1
atgaattcaaaaagtttgcaaaacattgcctcgagcaaatctgcgtcaaatacgatggcaactcctcagaaaatgcagca
ttatatggaaaaacatcgtcttgggcccctgtttgagaatttaatgaacaaagtcctacatgaccagcctgaggatccct
tggttttcctcataaaggctttatacaggaaggcaggactagaagccccccaggaactcaaacatggacgctctgccatg
agacaaagttcacctgaaagagcagcaataagaaataggagtccagaaatgagtcgtaaggcagccactcaagcatgggc
atcagagtcttttgacaaagatagaagttatgataaaccctggttatcacacagcaagaagtctcgacccaagacagctg
atgaaattgcaatgtccaagagccttatcaattatacgtacaattataagcaggatggtgatgtggccccatataccagt
ggagtataccatgggcccagacggattgagagtgacgaccctttggcaggggagataatgaacagcagggaatcaccaca
aaaggcagctactacagaagcggatatacatgtactgaaaagtaaaagtcgggtcaaaggtcgagggatgatgagtatga
ctcacagaaaggaattagaggaagctgtgaagaatgctgaccaacattctgatgattctggttataatgagagggaccaa
gctgatgacgctatcgagttgttagaagatgcagaggagctacagagagaaggtgtgaccaacatcccagagtcaggata
cagacttagtaagatgttaagacagcgacaggaagataccagagtcaagctaaatatcaagatttcagacccgggtatga
agcctggtgacagatatgactctatgaaatccatggattccttcagaggttatgaatctgatgatgagagaccacaaaca
ggaatgtctggattccgtacatcgcccggtggaagtgatatggacgaggagtttgagagtgtctcccaagtcacgggtcc
tagacgcccagtatggaacgtaggggccgactctgatgcaactttaccagctaaatatggtgagaacccagcatcaaaca
gacccagagaatctatagagtcatttacagaacaaccatatgctaaaacctggacacccggtaaccaaggcaaatctcta
gagacccctgcaatggccaatgttcaggagtcggtgagatcagagagtggggtgtggcaaatacccagggcagattcaga
gacaagtctgtcagagtggacacagaaccctggtaaatcaggagggaagagacctccccctagagcttattga
Transcript IDpfu_aug2.0_2481.1_05550.t2
Definition-
>pfu_aug2.0_2481.1_05550.t2
atgaattcaaaaagtttgcaaaacattgcctcgagcaaatctgcgtcaaatacgatggcaactcctcagaaaatgcagca
ttatatggaaaaacatcgtcttgggcccctgtttgagaatttaatgaacaaagtcctacatgaccagcctgaggatccct
tggttttcctcataaaggctttatacaggaaggcaggactagaagccccccaggaactcaaacatggacgctctgccatg
agacaaagttcacctgaaagagcagcaataagaaataggagtccagaaatgagtcgtaaggcagccactcaagcatgggc
atcagagtcttttgacaaagatagaagttatgataaaccctggttatcacacagcaagaagtctcgacccaagacagctg
atgaaattgcaatgtccaagagccttatcaattatacgtacaattataagcaggatggtgatgtggccccatataccagt
ggagtataccatgggcccagacggattgagagtgacgaccctttggcaggggagataatgaacagcagggaatcaccaca
aaaggcagctactacagaagcggatatacatgtactgaaaagtaaaagtcgggtcaaaggtcgagggatgatgagtatga
ctcacagaaaggaattagaggaagctgtgaagaatgctgaccaacattctgatgattctggttataatgagagggaccaa
gctgatgacgctatcgagttgttagaagatgcagaggagctacagagagaaggtgtgaccaacatcccagagtcaggata
cagacttagtaagatgttaagacagcgacaggaagataccagagtcaagctaaatatcaacctgtatcccggcgctatgc
cctctgacagcctaatgggtgacagatatgactctatgaaatccatggattccttcagaggttatgaatctgatgatgag
agaccacaaacaggaatgtctggattccgtacatcgcccggtggaagtgatatggacgaggagtttgagagtgtctccca
agtcacgggtcctagacgcccagtatggaacgtaggggccgactctgatgcaactttaccagctaaatatggtgagaacc
cagcatcaaacagacccagagaatctatagagtcatttacagaacaaccatatgctaaaacctggacacccggtaaccaa
ggcaaatctctagagacccctgcaatggccaatgttcaggagtcggtgagatcagagagtggggtgtggcaaatacccag
ggcagattcagagacaagtctgtcagagtggacacagaaccctggtaaatcaggagggaagagacctccccctagagctt
attga
Transcript IDpfu_aug2.0_2481.1_05550.t3
Definition-
>pfu_aug2.0_2481.1_05550.t3
atgaattcaaaaagtttgcaaaacattgcctcgagcaaatctgcgtcaaatacgatggcaactcctcagaaaatgcagca
ttatatggaaaaacatcgtcttgggcccctgtttgagaatttaatgaacaaagtcctacatgaccagcctgaggatccct
tggttttcctcataaaggctttatacaggaaggcaggactagaagccccccaggaactcaaacatggacgctctgccatg
agacaaagttcacctgaaagagcagcaataagaaataggagtccagaaatgagtcgtaaggcagccactcaagcatgggc
atcagagtcttttgacaaagatagaagttatgataaaccctggttatcacacagcaagaagtctcgacccaagacagctg
atgaaattgcaatgtccaagagccttatcaattatacgtacaattataagcaggatggtgatgtggccccatataccagt
ggagtataccatgggcccagacggattgagagtgacgaccctttggcaggggagataatgaacagcagggaatcaccaca
aaaggcagctactacagaagcggatatacatgtactgaaaagtaaaagtcgggtcaaaggtcgagggatgatgagtatga
ctcacagaaaggaattagaggaagctgtgaagaatgctgaccaacattctgatgattctggttataatgagagggaccaa
gctgatgacgctatcgagttgttagaagatgcagaggagctacagagagaaggtgtgaccaacatcccagagtcaggata
cagacttagtaagatgttaagacagcgacaggaagataccagagtcaagctaaatatcaagatttcagacccgggtatga
agcctgtacgtaaagtaggcaagaacagactagggttttatggaggcctgtatcccggcgctatgccctctgacagccta
atgggtgacagatatgactctatgaaatccatggattccttcagaggttatgaatctgatgatgagagaccacaaacagg
aatgtctggattccgtacatcgcccggtggaagtgatatggacgaggagtttgagagtgtctcccaagtcacgggtccta
gacgcccagtatggaacgtaggggccgactctgatgcaactttaccagctaaatatggtgagaacccagcatcaaacaga
cccagagaatctatagagtcatttacagaacaaccatatgctaaaacctggacacccggtaaccaaggcaaatctctaga
gacccctgcaatggccaatgttcaggagtcggtgagatcagagagtggggtgtggcaaatacccagggcagattcagaga
caagtctgtcagagtggacacagaaccctggtaaatcaggagggaagagacctccccctagagcttattga

Protein
Protein IDpfu_aug2.0_2481.1_05550.t1
Definition-
>pfu_aug2.0_2481.1_05550.t1
MNSKSLQNIASSKSASNTMATPQKMQHYMEKHRLGPLFENLMNKVLHDQPEDPLVFLIKALYRKAGLEAPQELKHGRSAM
RQSSPERAAIRNRSPEMSRKAATQAWASESFDKDRSYDKPWLSHSKKSRPKTADEIAMSKSLINYTYNYKQDGDVAPYTS
GVYHGPRRIESDDPLAGEIMNSRESPQKAATTEADIHVLKSKSRVKGRGMMSMTHRKELEEAVKNADQHSDDSGYNERDQ
ADDAIELLEDAEELQREGVTNIPESGYRLSKMLRQRQEDTRVKLNIKISDPGMKPGDRYDSMKSMDSFRGYESDDERPQT
GMSGFRTSPGGSDMDEEFESVSQVTGPRRPVWNVGADSDATLPAKYGENPASNRPRESIESFTEQPYAKTWTPGNQGKSL
ETPAMANVQESVRSESGVWQIPRADSETSLSEWTQNPGKSGGKRPPPRAY
Protein IDpfu_aug2.0_2481.1_05550.t2
Definition-
>pfu_aug2.0_2481.1_05550.t2
MNSKSLQNIASSKSASNTMATPQKMQHYMEKHRLGPLFENLMNKVLHDQPEDPLVFLIKALYRKAGLEAPQELKHGRSAM
RQSSPERAAIRNRSPEMSRKAATQAWASESFDKDRSYDKPWLSHSKKSRPKTADEIAMSKSLINYTYNYKQDGDVAPYTS
GVYHGPRRIESDDPLAGEIMNSRESPQKAATTEADIHVLKSKSRVKGRGMMSMTHRKELEEAVKNADQHSDDSGYNERDQ
ADDAIELLEDAEELQREGVTNIPESGYRLSKMLRQRQEDTRVKLNINLYPGAMPSDSLMGDRYDSMKSMDSFRGYESDDE
RPQTGMSGFRTSPGGSDMDEEFESVSQVTGPRRPVWNVGADSDATLPAKYGENPASNRPRESIESFTEQPYAKTWTPGNQ
GKSLETPAMANVQESVRSESGVWQIPRADSETSLSEWTQNPGKSGGKRPPPRAY
Protein IDpfu_aug2.0_2481.1_05550.t3
Definition-
>pfu_aug2.0_2481.1_05550.t3
MNSKSLQNIASSKSASNTMATPQKMQHYMEKHRLGPLFENLMNKVLHDQPEDPLVFLIKALYRKAGLEAPQELKHGRSAM
RQSSPERAAIRNRSPEMSRKAATQAWASESFDKDRSYDKPWLSHSKKSRPKTADEIAMSKSLINYTYNYKQDGDVAPYTS
GVYHGPRRIESDDPLAGEIMNSRESPQKAATTEADIHVLKSKSRVKGRGMMSMTHRKELEEAVKNADQHSDDSGYNERDQ
ADDAIELLEDAEELQREGVTNIPESGYRLSKMLRQRQEDTRVKLNIKISDPGMKPVRKVGKNRLGFYGGLYPGAMPSDSL
MGDRYDSMKSMDSFRGYESDDERPQTGMSGFRTSPGGSDMDEEFESVSQVTGPRRPVWNVGADSDATLPAKYGENPASNR
PRESIESFTEQPYAKTWTPGNQGKSLETPAMANVQESVRSESGVWQIPRADSETSLSEWTQNPGKSGGKRPPPRAY

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Okinawa Institute of Science and Technology
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