Gene
| Gene Model ID | pfu_aug2.0_2425.1_18810 |
|---|---|
| Locus | scaffold2425.1 : 1 ... 33023 : + |
| To GenomeBrowser | scaffold2425.1:1..33023 |
| Genes list of scaffold | scaffold2425.1 |
| Synonym | pfu_aug1.0_2528.1_37303 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2425.1_18810.t1 | 3 | 1 | AAA_11 | 85 | 148 | 0.0 | 173.6 | 1.5 | 5500.0 | -3.4 |
| pfu_aug2.0_2425.1_18810.t1 | 3 | 2 | AAA_11 | 818 | 848 | 0.0 | 173.6 | 4.0 | 15000.0 | -74.5 |
| pfu_aug2.0_2425.1_18810.t1 | 3 | 3 | AAA_11 | 1562 | 1845 | 0.0 | 173.6 | 0.0 | 0.0 | 173.6 |
| pfu_aug2.0_2425.1_18810.t1 | 1 | 1 | AAA_19 | 1586 | 1636 | 1.2e-07 | 31.3 | 7.3e-11 | 2.7e-07 | 30.2 |
| pfu_aug2.0_2425.1_18810.t1 | 1 | 1 | AAA_12 | 1853 | 2016 | 1.10002e-42 | 145.7 | 1.4013e-45 | 6.39973e-42 | 143.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2425.1_18810.t1 | gi|524882058|ref|XP_005097674.1| | PREDICTED: uncharacterized protein LOC101847819 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2425.1_18810.t1 | gi|632969170|ref|XP_007900944.1| | PREDICTED: probable helicase senataxin [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_2425.1_18810.t1 | gi|719777698|ref|XP_010221371.1| | PREDICTED: LOW QUALITY PROTEIN: probable helicase senataxin [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_2425.1_18810.t1 | gi|697829525|ref|XP_009635139.1| | PREDICTED: probable helicase senataxin [Egretta garzetta] | 0.0 |
| pfu_aug2.0_2425.1_18810.t1 | gi|701291894|ref|XP_010021806.1| | PREDICTED: probable helicase senataxin [Nestor notabilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2425.1_18810.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2425.1_18810.t1 aagccatggtaagaagggatctgatgttatagacctgacggaagatgatgatacaggatctatgtccagcagtgaacatg ataatacagatagtaacgatgtgcggaaaagtaaagaagagctattagagaaagatacaaacacctatagatgtccagtt tgtgatgaggacatagagtgtaataatctcatagaaatggaggaacacatagacatttgtctgaacatcagcacaatcaa ggagattgaggaaaaagaagaaattccagttatcagaaagagcaataggagatccagccctagggttcaggagaccttta ttggggatagtgctgagaaggacacagatgtcaaaaagaacaaaagtcccagctgtagggttcaggacaccactattggg gatagtgcaattaggtctgagaagaacactgatgtcaaaaggaacaaaagtcccagccataaggttaaggagaccactaa gggggagagtgcaattagttctgaagaagacacagaggatttctatggtgctcaaacacaggccatcccatgtcacaaag aaaacacagaccaaacaaacacagatgatccctacatggcccagacacaggtggatgacatgtaccgggatttgtctgat gatagtgatgatgatatcaatgataagtacctagctgctactcaaatagatgcagatgttttatctaaatccgtcaagtc caatagccggatgagaaaggacagtgaggaggatgctgacattgatctgtatggagctatgactcaggtagatggagaca gagttatgtcccctgatcaagatgacccttatattactgagacagtggaagacacagggcttggtactttgggagatgat gatttgtattcagctcagacacaggtggatgttgatatgataagccactctagtgaagatgaaaatcaggaggagagtgt agtggacaaacagcaggatcatactcaagataagccaaacgatgcaaagagagatcaaaggatcggagccaatagaacac ctagtcggccagaacttgttgggcagtcctccagcttaataagaatcagacaattatcaaactcaggtcgtaaaccaata cttgtatctcctcaaaaattgaaaagcctctccgagaaaagacaagaattcaagcaacaaaaggagaaagagaaatcatc tgatgcagaaaaatctactggtctcgacaaaagcaagttttattcctcgaaaaatctctttgagaaattttcatctgatg ctggttcatcaaggccaaatattgatgaaaagaaaagacagaactctggtggatggatgtctaagtcagaggcacagcaa aaacgaaagcggcacaagtcaaaggatgtggttgatgatagtactgcgctaaagagagctatgatgaacgctaagtgcca gttaaacgacaggaagtttcacactgctttacatccagaacctgtaattaggagatcagtttcgtcaaccagtacctcca gtcaatctgaggatgtaaggccccctaaacttgaagaaataatgaagctaggccttcctgttctggagtatgaaaataag gaccaaagggaagacaactcttcagcactaattcaggaaagcacaaactccgaagtgtctgcatcacagaaaaataagga agctcatagtaaatcatcagtacagtcctcgggaaaaaatgatggactgaagaaggattctatgtctaagaagtcatcta accatgggaaagaaaatgcagaaaaatctactggtctcgacaaaagcaagttttattccttgaaaaatctctttgagaaa tcttcatctgatgctggttcatcaaggccaaatattgatgaaaagaaaagacagaactctggtggatggatgtctaagtc agaggcacagcaaaaacgaaagcggcacaagtcaaaggatgtggttgatgatagtactgcgctaaagagagctatgatga acgccaagtgccagttaaacgacaggaagtttcacactgctttacatccagaacctgtaattaggagatcagtttcgtca accagtacctccagtcaatctgaggatgtaaggcctcctaaacttgaagaaataatgaagctaggccttcctgttctgga gtatgaaaataaggaccaaagggaagacaactcttcagcactaattcaggaaagcaagcccaaggataagaacaaagaag gagagagaaagaggagtatagagagcaaggaatcatcatcatctgataaaaaggacaagaaggacaaaagaagtgaaaat aaggatagtagtaagcaggaaattgtaaaaggtgatagtaaagagaaggaaaaaaggactagttcaggagaaaaactcag caaaagtacagatagggagacgagcaaaaaagattcaaaacatggtcaggaccataggacagacaaaagtgctgacagga gaggcagtaaagaatatgataaagatagtaaaaggtgtaaggaaaataagaaagacagtgaaagaaataaggaaaataat aaggatagtgaaagaaataaggaaaataataaggatagtaagagaaataaggaaaatgataaggatagtgtcgagagaca taaggaaaatgataaggatagtcagagaaataaggaaaatgataaagacagtaaaaggcacaaggaacccaataaagata gtgacagacataaggatcggaggaaagacgataagcattcttctcatcattcatcttcatcacatagacattcctctaaa catcgtcatcacaaagatcataagtcatctagtcatagacatcggcacggctcgggagatagcaaaaaggagaaaacaac ttcctcctctgatgatggaaaggttgaaggaaatgtgtcatcaagtcacaaagcagaggggatagagaaagagcaaagta ataatgtgaaaactacggagtctttacccagcactgtagatagatcagctggtgtaataaaacacaaagaggtagcaatt gacctcaatcataatagtgaagctagcactagtgataaagttgtaagttgtgataattcattagtgagtgataattcatt agtgacgacaaaagttagtggagagaaagagtcaaattcaaatgaactaagcaatgctagtgtaagtgatagggaaactt tctcaagcaaacttcagaatgcaaaagttgatgtttttgtgtcgtcccaagagtgtagtaaagatgtgcataatgatgtt gaaactgttgaaatagagccccagtcagaagttagtgaatccgagagaaagaggcattatgagaaatttatcatcaagaa aaaatcatccttaaaggggattttgaaggatcctacaaagccatctaaaaaggaaaaaagaaatgttacctttaaatcag tggataaaccaactgcccaggaaagaacgcagagatacatacggaatctgactgaaaaggggccattacagccccagaga aggtctagtattaatatccctactactatgtctgaaacaaataccacattgaagtcacaaagaggagtaccaggaccctc ggggagctcaatgggaagacagacaaacgtacctgttacagagagacctaacttaatggagaagttacccttaggaagta atgctgttcccactcaagcaaaacttcaacagctacaacaaaagaggccaaatgtaccaagcgaagttaggggttacata aatgtccaaccctctacaagcagaatgccagatgccgtgatgatgcccccaccatctttacaacaaaatgtatcacaatt agattgctcatcaccagattattacctgtcccgacttcttaaatggaatgtcaagtggtttgacgaacaaggtagtcatt cagaagtaaaatttaaccatcgtaaatctgagatcaaggagttaccacctataatggaaggaccctgtatcctgtaccat atacctagtgtatttaagacctctaaggattacttggaaatatttacacctcatctcatggctgaaacatgggaaatagc aatgaaagctcatacaggaaacaaatctaaaccgaagtcaaaaataaaagtactttatacagaaagggtcaaatctagtg agaagctgaggcgactaaaattctatggagtccttaaaaagaaggatgctgatgagcttcgatcaatggacgtcatgtct gatggtggcttggtaataatgcatatgtggggacagcaccagcaaaactctaacggtccgatactacgaccagaacaaca gaaacctacctactcgttacaactgtgtatggtggaacgtgttaattactacaccagggattcagacaaaatgcagacac tgaataccttccctttatttaatgaagaggaagcagtcaaatccaaggattttgtcgttgtcttatttataatgaaggga agggcctcatatttccaacctttacaggacaagttttgctatatagaaccaatcgtatcactagtgtcaaccatgcgaca gctaacagcgatgaccagtctgcctaacagtccattatgtaaacatatactggatcccaaagacattgcagtgtttggta ccatgtggaacccatcagatgtcggccatttccagtccatttccaagtataactattctcagagacaagctatagacatg gccggcagactgtcggtaactcctcccagtgtacctaagatcatgctgctacagggaccgccaggatcgggtaaaagtca cacgatcgtagggatggtagataggatcatacaggaaactcatagacagggttgtatatgcctctgtgctccatcaaatg cagctattgatgtaatagtaaagaaactgatggagtataagaaaacaatgttaagaaaatcaggaaaagaattgtacaac ctaggaattgtgaggattggtaaaccgagcaccatgcttccagaggtcaaacctatcgcactgaacgaattagtacaagc aaacctcaaagaagatgccgtgaagcagcacatgcagaacattcctccgagtgtcagagatgacctgtcggtaaaaaaac aacgaataaaagtactcaatgaccaacttagtgtccttgaaacaagaggaaaacatatgcaggcaagaaaagtgatgtca gatataaacaaagagaggaagcttctggaggacatggaaagacaatatctccctcagctgccgaaggcttcttatgccca agaatatgaaatgaggaggaagatattactgaaagctgatatcatatgtggcacactgaactcttttggaagtgactccg tgagggacattatcattagtggcatacaaggcaacaaattcagatttacatgtgctatcatagatgaggcctgccaagcc aatgaattggactgtttgatacctctagtttatggaatcaccaagttgatattggtaggtgatccagaacagttaccccc tactgttctatctcaggatggatcaagaaatagcctccttcccagtagatacatctatgatgaaaaacttaaaacagaca gttgtgtggctttgcgtgagagtccaatgaagccatatctgttgtatgacgtagaagacagtcaggagaaccagtcacaa atatcagggtcagtatctgtaacaaatatcaggtctatcagcaatgttactgaggctgagttcatagtggagttgacagc atatatcttggagaatagatgggttgctgcacatgatattggaatcattgctccttacaagaatcagaagctcctgttgt tgaatgaactacgcagacataaactaaaggcaatgtgcaatgttgaggtaggaacagtcgatggatttcaaggtcgggaa aaacgagtaatcatcttgtcatgtgttagagctaaaagtgattccggaagtatagggttcatggcaaatcgtcgaagaat gaatgtagccctgacacgagccaagattgccttgtatattgttggtcatcttgattctttgaaggatgctaaccgtgaat ggagggagcttatcaatgatgctgaatcacggaacttgatcgtaaatgtagaagcccaaagacatttcaaaagagctata cagatgtgttgtagtccctctaaaacatcgcgatag |
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Protein
| Protein ID | pfu_aug2.0_2425.1_18810.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2425.1_18810.t1 SHGKKGSDVIDLTEDDDTGSMSSSEHDNTDSNDVRKSKEELLEKDTNTYRCPVCDEDIECNNLIEMEEHIDICLNISTIK EIEEKEEIPVIRKSNRRSSPRVQETFIGDSAEKDTDVKKNKSPSCRVQDTTIGDSAIRSEKNTDVKRNKSPSHKVKETTK GESAISSEEDTEDFYGAQTQAIPCHKENTDQTNTDDPYMAQTQVDDMYRDLSDDSDDDINDKYLAATQIDADVLSKSVKS NSRMRKDSEEDADIDLYGAMTQVDGDRVMSPDQDDPYITETVEDTGLGTLGDDDLYSAQTQVDVDMISHSSEDENQEESV VDKQQDHTQDKPNDAKRDQRIGANRTPSRPELVGQSSSLIRIRQLSNSGRKPILVSPQKLKSLSEKRQEFKQQKEKEKSS DAEKSTGLDKSKFYSSKNLFEKFSSDAGSSRPNIDEKKRQNSGGWMSKSEAQQKRKRHKSKDVVDDSTALKRAMMNAKCQ LNDRKFHTALHPEPVIRRSVSSTSTSSQSEDVRPPKLEEIMKLGLPVLEYENKDQREDNSSALIQESTNSEVSASQKNKE AHSKSSVQSSGKNDGLKKDSMSKKSSNHGKENAEKSTGLDKSKFYSLKNLFEKSSSDAGSSRPNIDEKKRQNSGGWMSKS EAQQKRKRHKSKDVVDDSTALKRAMMNAKCQLNDRKFHTALHPEPVIRRSVSSTSTSSQSEDVRPPKLEEIMKLGLPVLE YENKDQREDNSSALIQESKPKDKNKEGERKRSIESKESSSSDKKDKKDKRSENKDSSKQEIVKGDSKEKEKRTSSGEKLS KSTDRETSKKDSKHGQDHRTDKSADRRGSKEYDKDSKRCKENKKDSERNKENNKDSERNKENNKDSKRNKENDKDSVERH KENDKDSQRNKENDKDSKRHKEPNKDSDRHKDRRKDDKHSSHHSSSSHRHSSKHRHHKDHKSSSHRHRHGSGDSKKEKTT SSSDDGKVEGNVSSSHKAEGIEKEQSNNVKTTESLPSTVDRSAGVIKHKEVAIDLNHNSEASTSDKVVSCDNSLVSDNSL VTTKVSGEKESNSNELSNASVSDRETFSSKLQNAKVDVFVSSQECSKDVHNDVETVEIEPQSEVSESERKRHYEKFIIKK KSSLKGILKDPTKPSKKEKRNVTFKSVDKPTAQERTQRYIRNLTEKGPLQPQRRSSINIPTTMSETNTTLKSQRGVPGPS GSSMGRQTNVPVTERPNLMEKLPLGSNAVPTQAKLQQLQQKRPNVPSEVRGYINVQPSTSRMPDAVMMPPPSLQQNVSQL DCSSPDYYLSRLLKWNVKWFDEQGSHSEVKFNHRKSEIKELPPIMEGPCILYHIPSVFKTSKDYLEIFTPHLMAETWEIA MKAHTGNKSKPKSKIKVLYTERVKSSEKLRRLKFYGVLKKKDADELRSMDVMSDGGLVIMHMWGQHQQNSNGPILRPEQQ KPTYSLQLCMVERVNYYTRDSDKMQTLNTFPLFNEEEAVKSKDFVVVLFIMKGRASYFQPLQDKFCYIEPIVSLVSTMRQ LTAMTSLPNSPLCKHILDPKDIAVFGTMWNPSDVGHFQSISKYNYSQRQAIDMAGRLSVTPPSVPKIMLLQGPPGSGKSH TIVGMVDRIIQETHRQGCICLCAPSNAAIDVIVKKLMEYKKTMLRKSGKELYNLGIVRIGKPSTMLPEVKPIALNELVQA NLKEDAVKQHMQNIPPSVRDDLSVKKQRIKVLNDQLSVLETRGKHMQARKVMSDINKERKLLEDMERQYLPQLPKASYAQ EYEMRRKILLKADIICGTLNSFGSDSVRDIIISGIQGNKFRFTCAIIDEACQANELDCLIPLVYGITKLILVGDPEQLPP TVLSQDGSRNSLLPSRYIYDEKLKTDSCVALRESPMKPYLLYDVEDSQENQSQISGSVSVTNIRSISNVTEAEFIVELTA YILENRWVAAHDIGIIAPYKNQKLLLLNELRRHKLKAMCNVEVGTVDGFQGREKRVIILSCVRAKSDSGSIGFMANRRRM NVALTRAKIALYIVGHLDSLKDANREWRELINDAESRNLIVNVEAQRHFKRAIQMCCSPSKTSR |
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