Gene
| Gene Model ID | pfu_aug2.0_241.1_03868 |
|---|---|
| Locus | scaffold241.1 : 317586 ... 332794 : + |
| To GenomeBrowser | scaffold241.1:317586..332794 |
| Genes list of scaffold | scaffold241.1 |
| Synonym | pfu_aug1.0_17213.1_32782 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_241.1_03868.t1 | 1 | 1 | adh_short | 33 | 201 | 2.0e-24 | 86.3 | 9.2e-28 | 2.7e-24 | 85.9 |
| pfu_aug2.0_241.1_03868.t1 | 1 | 1 | KR | 35 | 198 | 6.8e-06 | 25.8 | 3.8e-09 | 1.1e-05 | 25.1 |
| pfu_aug2.0_241.1_03868.t1 | 1 | 1 | adh_short_C2 | 41 | 222 | 5.8e-10 | 39.3 | 2.7e-13 | 8.1e-10 | 38.8 |
| pfu_aug2.0_241.1_03868.t1 | 1 | 1 | DUF1776 | 126 | 297 | 6.3e-08 | 32.1 | 1.1e-10 | 3.1e-07 | 29.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_241.1_03868.t1 | gi|410909215|ref|XP_003968086.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like isoform X1 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_241.1_03868.t1 | gi|551492737|ref|XP_005797938.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_241.1_03868.t1 | gi|584000219|ref|XP_006795167.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_241.1_03868.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_241.1_03868.t1 atgacttgggaactcatactatgtacgtttatttccgtcgttctgataaagttcttcagagattcctggttccaaaaaaa gattccaatggatgggaaagtaatattcataacaggttgtgatacaggtttcggcaatgcacttgcacgaaaattagatc aattgggttgtacagtgtttgccggttgctttttatcctccgaaaattgtgcaaaaacactaaaggaggaaacatcctct cgccttaaagtcattgaccttgatatctccaatgacaaatccgtcgaaaaagcgcgtgattctgtgaaaaactatctcaa cagctccgggagtgaactctgggcaatagtcaataatgcaggtatttgtattagatcacacatagaagtttgttcgatgg acatcttccacaaaatggcagaagttaacttatttggaacaataaggatgacaaaagtttttctacccttactacgaatt tcaaaaggtagggttatcaatgtaagtagtgtgcatggacgctacggaatgcccacaatgtcatcttatgccatatcaaa gcatggggtggaaaatttctctgacattctaaggatggagatgaggcaattcggggtgaaggtatcgattatagaaccag gtcgatttggtgctgcaacagggatatcctctggtattgctttagaggagcgcattcgatcattagatgatacgtggaga aaagctgatgaggagataaagacgctttataaaagcaggtttgaggagctgaggcgcggactgtctaccagacgtaacaa gaacgcctctagtcagactatggaaccagttctcaatgctatgttagatgccatagaaaacgtccaaccaaaggaaagat atctagtaggaggcatacgttttgacgatcattgcttcctagcacttgttggcccagtcctgccctcgtggattatggat agattgacgttgtacattacaggcgaatcataa |
|
Protein
| Protein ID | pfu_aug2.0_241.1_03868.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_241.1_03868.t1 MTWELILCTFISVVLIKFFRDSWFQKKIPMDGKVIFITGCDTGFGNALARKLDQLGCTVFAGCFLSSENCAKTLKEETSS RLKVIDLDISNDKSVEKARDSVKNYLNSSGSELWAIVNNAGICIRSHIEVCSMDIFHKMAEVNLFGTIRMTKVFLPLLRI SKGRVINVSSVHGRYGMPTMSSYAISKHGVENFSDILRMEMRQFGVKVSIIEPGRFGAATGISSGIALEERIRSLDDTWR KADEEIKTLYKSRFEELRRGLSTRRNKNASSQTMEPVLNAMLDAIENVQPKERYLVGGIRFDDHCFLALVGPVLPSWIMD RLTLYITGES |
|