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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_241.1_03866
Locus scaffold241.1 : 303210 ... 309321 : +
To GenomeBrowser scaffold241.1:303210..309321
Genes list of scaffold scaffold241.1
Synonym pfu_aug1.0_17708.1_25645

Manual annotation
Annotation by Blast2GO
Annotation GO
d-beta-hydroxybutyrate mitochondrial-like GO:0008152

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_241.1_03866.t1 gi|260826630|ref|XP_002608268.1| hydroxysteroid dehydrogenase 2 [Branchiostoma floridae] 3.0e-20
pfu_aug2.0_241.1_03866.t1 gi|657593397|ref|XP_008301269.1| PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like [Stegastes partitus] 2.0e-19
pfu_aug2.0_241.1_03866.t1 gi|390360437|ref|XP_003729699.1| 6.0e-19
pfu_aug2.0_241.1_03866.t1 gi|676480120|ref|XP_009061961.1| hypothetical protein LOTGIDRAFT_55406, partial [Lottia gigantea] 7.0e-19
pfu_aug2.0_241.1_03866.t1 gi|530608096|ref|XP_005295721.1| PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like [Chrysemys picta bellii] 9.0e-19

Transcript
Transcript IDpfu_aug2.0_241.1_03866.t1
Definition-
>pfu_aug2.0_241.1_03866.t1
atgacatgggagctcgtactgtgtgcgctctttactatcgttgtcgtgaagtttctcagggattcctggtttaagaaaac
gattccattggatggcaaagttatatttataacaggctgtgatacaggtttcggcaatgctcttgcacgaaaattagaca
gtttgggttgtgtagtgtttgccggttgtttgtcctcctcagggaaaggcgcaaaagtgctacaagaagaaacgtcccct
cgtctaaaagtccttgaccttgatacctcagatgacaaatccgtggaaaaagcacgcgattttgtgaaaaactacctcaa
cagctcagacagtggtaagaaaaattgttag

Protein
Protein IDpfu_aug2.0_241.1_03866.t1
Definition-
>pfu_aug2.0_241.1_03866.t1
MTWELVLCALFTIVVVKFLRDSWFKKTIPLDGKVIFITGCDTGFGNALARKLDSLGCVVFAGCLSSSGKGAKVLQEETSP
RLKVLDLDTSDDKSVEKARDFVKNYLNSSDSGKKNC

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