Gene
| Gene Model ID | pfu_aug2.0_241.1_03863 |
|---|---|
| Locus | scaffold241.1 : 182946 ... 241619 : - |
| To GenomeBrowser | scaffold241.1:182946..241619 |
| Genes list of scaffold | scaffold241.1 |
| Synonym | pfu_aug1.0_8574.1_60452 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cgmp-dependent protein kinase 1 isoform 1 | GO:0004692 GO:0005246 GO:0005515 GO:0005829 GO:0005886 GO:0006468 GO:0030036 GO:0032555 GO:0043087 GO:0043168 GO:0045986 GO:0048699 GO:0090331 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_241.1_03863.t1 | 3 | 1 | Med4 | 40 | 93 | 8.0e-08 | 31.8 | 3.8e-05 | 0.014 | 14.8 |
| pfu_aug2.0_241.1_03863.t1 | 3 | 2 | Med4 | 134 | 199 | 8.0e-08 | 31.8 | 9.0e-07 | 0.00033 | 20.1 |
| pfu_aug2.0_241.1_03863.t1 | 2 | 1 | cNMP_binding | 270 | 351 | 2.7e-25 | 87.9 | 6.4e-19 | 2.3e-16 | 59.3 |
| pfu_aug2.0_241.1_03863.t1 | 2 | 2 | cNMP_binding | 440 | 495 | 2.7e-25 | 87.9 | 1.4e-08 | 4.9e-06 | 26.2 |
| pfu_aug2.0_241.1_03863.t1 | 1 | 1 | Pkinase | 511 | 629 | 4.7e-25 | 88.2 | 3.4e-27 | 1.2e-24 | 86.8 |
| pfu_aug2.0_241.1_03863.t1 | 1 | 1 | Pkinase_Tyr | 512 | 615 | 5.7e-10 | 38.7 | 4.5e-12 | 1.6e-09 | 37.1 |
| pfu_aug2.0_241.1_03863.t1 | 3 | 3 | Med4 | 586 | 598 | 8.0e-08 | 31.8 | 3.3 | 1200.0 | -1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_241.1_03863.t1 | gi|297686920|ref|XP_002820979.1| | PREDICTED: cGMP-dependent protein kinase 1 [Pongo abelii] | 0.0 |
| pfu_aug2.0_241.1_03863.t1 | gi|676480723|ref|XP_009062152.1| | hypothetical protein LOTGIDRAFT_210612 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_241.1_03863.t1 | gi|759124270|ref|XP_011359949.1| | PREDICTED: cGMP-dependent protein kinase 1 [Pteropus vampyrus] | 0.0 |
| pfu_aug2.0_241.1_03863.t1 | gi|466084907|ref|XP_004285399.1| | PREDICTED: cGMP-dependent protein kinase 1 isoform X1 [Orcinus orca] | 0.0 |
| pfu_aug2.0_241.1_03863.t1 | gi|471358739|ref|XP_004369950.1| | PREDICTED: cGMP-dependent protein kinase 1 isoform X1 [Trichechus manatus latirostris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_241.1_03863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_241.1_03863.t1 atgccatgtagcggatttgaaggtatgccttacgacgactataaacgaaggagtgtttctatagaatttcaagacatggg cagtttgagagatttgcaattggccctacgtctgaaaatagaggagctacaccagcgagatgaactaatagacgagttag aaacggagttagatcagaaggacgaaatgattgagagattacagaatgaaatcgaaaaatacagagcggtcctcaagtca acgacagaacaagccaggaagcagacgacaatgtacagggaacgtagcaaacggtgtgcaatatcagcggaaccagctaa attcggctctatccttaacctgtataaaacaaaacgggtggtcaaaccatgctcttatgcaatgacgataacaaaaagaa tgggaacactcagagacatgcaactttcgcttcaggaaaagatagaagaattgcgacaaagagacgagttgatagatgag cttgaaaccgaattagatgaaaaagacgagctcattaagaagttacagaatgaaatagacaagtatcggtctgtcctaag gcctcccgtagggctacagaactctccaactaaaaagaaggtgtcacagactagagatcgaacaaaacgctgtgcgatat cagctgaaccagcaaggttcttggattttgtcaatcagaagcaaattacaaaatttccgaaatctaataactccagggaa ctgattcgtcaagccatattggacaacgactttatgaagaatctggacatgggtcagatacgggagatagtggactgtat gtacccagtggaatataccaaagatagtcttattatcaaagagggggatgtagggtcactggtctatgttatggaagatg gaaaggttgaagtgacaaaagatggacagaagttatgtaatatgggacctgccaaagtatttggtgaattagccattttg tacaattgcacaagaactgcaagtgtgaaagctttgataaactgcaaactatgggcaatagacagaccctgtttccaaag tatcatgatgagaactggtttaatgagacacacagaacatatggaattcctcagaagcgtcccgacgttcaaacatctac cggaggagtcattgagtaaaattgccgatgttcttgaagagaataaatcaagaaacgaaatgaaatggttttattccaga gaaacacaatcaaatgtagatgaccttcatttacaaggagtttccaaggatcttcctgaacactcggggttcccttattc ggatgtttcacaatataaagctttgacgtcaactgacgttaaggtaacaaagaagtcatccaaagccaccgatgagacgt tcattcgatatctccaaagaggagagttctttggtgaaagagctcttcagggtgaggatgttcgcacagccagtattatt gcttctgaccctgcgggtgtagattgtctagtcatcgatagagatatcctgcctttgtttaaaatacaattcatctcatc ttttccatatgtagactttggttttgccaagaaagttggtttagggcgtaagacatggacattttgcggtacccccgagt atgtggctccagaaattatactgaataaaggccacgacatatcggccgattactggtcactcggaatactcatgtttgaa cttctcacgggcagtcctccattttccggacaggaccctatgaaaacctacaacataattctcaagggaatagatgccat agacttttcacggaaaatcagcaaaaatgctacaaacttaattaagaaactgtgtcgcgaaactccctcagaacgtttag gatttggtagagggggaattagggaaattcaaaaacataagtggttcgaaggcttcaactgggaaggcttgaaaaaacgt acactcaacgtacctatcattccagcggtgaaatctgcagtcgacacgtctaatttcgatgactacccggatgaggaaga agacccacctccagatgacgtcacgggatgggaccgagatttctag |
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Protein
| Protein ID | pfu_aug2.0_241.1_03863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_241.1_03863.t1 MPCSGFEGMPYDDYKRRSVSIEFQDMGSLRDLQLALRLKIEELHQRDELIDELETELDQKDEMIERLQNEIEKYRAVLKS TTEQARKQTTMYRERSKRCAISAEPAKFGSILNLYKTKRVVKPCSYAMTITKRMGTLRDMQLSLQEKIEELRQRDELIDE LETELDEKDELIKKLQNEIDKYRSVLRPPVGLQNSPTKKKVSQTRDRTKRCAISAEPARFLDFVNQKQITKFPKSNNSRE LIRQAILDNDFMKNLDMGQIREIVDCMYPVEYTKDSLIIKEGDVGSLVYVMEDGKVEVTKDGQKLCNMGPAKVFGELAIL YNCTRTASVKALINCKLWAIDRPCFQSIMMRTGLMRHTEHMEFLRSVPTFKHLPEESLSKIADVLEENKSRNEMKWFYSR ETQSNVDDLHLQGVSKDLPEHSGFPYSDVSQYKALTSTDVKVTKKSSKATDETFIRYLQRGEFFGERALQGEDVRTASII ASDPAGVDCLVIDRDILPLFKIQFISSFPYVDFGFAKKVGLGRKTWTFCGTPEYVAPEIILNKGHDISADYWSLGILMFE LLTGSPPFSGQDPMKTYNIILKGIDAIDFSRKISKNATNLIKKLCRETPSERLGFGRGGIREIQKHKWFEGFNWEGLKKR TLNVPIIPAVKSAVDTSNFDDYPDEEEDPPPDDVTGWDRDF |
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