Gene
| Gene Model ID | pfu_aug2.0_241.1_03857 |
|---|---|
| Locus | scaffold241.1 : 102806 ... 105475 : - |
| To GenomeBrowser | scaffold241.1:102806..105475 |
| Genes list of scaffold | scaffold241.1 |
| Synonym | pfu_aug1.0_6497.1_45448 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein knotted- | GO:0003677 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_241.1_03857.t1 | 2 | 1 | Homeobox | 491 | 543 | 3.1e-20 | 71.5 | 3.8e-11 | 1.1e-07 | 31.3 |
| pfu_aug2.0_241.1_03857.t1 | 3 | 1 | Homeobox_KN | 504 | 543 | 5.9e-21 | 73.8 | 1.5e-10 | 4.5e-07 | 29.4 |
| pfu_aug2.0_241.1_03857.t1 | 2 | 1 | Homez | 518 | 541 | 7.1e-10 | 37.7 | 1.3e-05 | 0.038 | 13.0 |
| pfu_aug2.0_241.1_03857.t1 | 2 | 2 | Homeobox | 579 | 632 | 3.1e-20 | 71.5 | 4.2e-14 | 1.2e-10 | 40.7 |
| pfu_aug2.0_241.1_03857.t1 | 3 | 2 | Homeobox_KN | 592 | 631 | 5.9e-21 | 73.8 | 2.0e-14 | 5.9e-11 | 41.8 |
| pfu_aug2.0_241.1_03857.t1 | 2 | 2 | Homez | 608 | 632 | 7.1e-10 | 37.7 | 2.3e-08 | 7.0e-05 | 21.8 |
| pfu_aug2.0_241.1_03857.t1 | 3 | 3 | Homeobox_KN | 635 | 644 | 5.9e-21 | 73.8 | 2.2 | 6600.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_241.1_03857.t1 | gi|684365943|ref|XP_009162046.1| | hypothetical protein T265_00125 [Opisthorchis viverrini] | 1.0e-08 |
| pfu_aug2.0_241.1_03857.t1 | gi|667840797|ref|XP_007784566.1| | hypothetical protein W97_08509 [Coniosporium apollinis CBS 100218] | 2.0e-07 |
| pfu_aug2.0_241.1_03857.t1 | gi|524894552|ref|XP_005103773.1| | PREDICTED: uncharacterized protein LOC101854734 [Aplysia californica] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_241.1_03857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_241.1_03857.t1 atggccggacctctaaattccacatcactaccctatgacagtggcagcatctatcattacagactaccgtttatgtctcc tgcatctatgatggaaactgcagtccatggcaccgagagaaatgcttatagactaactgctaacaaaccgtatggaacct atgtggaccttaacacagacttattctcaccacctagaatagaggctgcatacctccctacatcaccctatgtatctccc attctcgcctccgtaccatcccctatatgtaactccaggccaagtctacaggaactgatgggaagtaacacaaacaatca gagctcttatctgaatcgattatacaggaatcccatgttccatgacctacagagactgttagcacaggaatgcctccata tgcaagtaccaacaaacctgatcaacaacgcgtggaaagcaccgccaactcctggtttacagaatcaggaggacgtcttc agtcatcatatgaagctacaggaaacatttctgaaacttagatccattgaaaagtttcaaagtgaggggctgcgtatcga atctgaatatagttcagatgtcggacaaattgaagttgctcgttaccaagctctgtgtgcagctgggtccagtacctctc aaagacgggcagtgaataggcactttgatgacaagaggatgaacttgatagtgaaatgtgaaagggaattagaaactatg actctacatgaaggattgaataatgtaagtagaacttatgaaacagaaaatgaaaatttctcagtgcaagaatttgattc aaattcaggtttccaaaataacaagaggaataataaagctaatgtggccagacagttggactttctcagtgatcaacata aaaagacaaaaggtcatagtgatgacttcaatgaggagtatgccagtgcagcaagttcacctgaatgtctggaggttgat atgagtcatgattcgttgaatgacaaagaggacagcatagtgactgatcaggtagatgtgaacctatgtgattctggtgt atgtgaagatgacagtagttctgttatatcagatcatgtcagtgaccaacaatgctgcagagaagatcattcatctatga cagtggaacattcttacaattcaaatgacatggaaacatgggatgaggaaagtataacagaatgtgacancctatgtgat tctggtgtatgtgaagatgacagtagttctgttatatcagatcatgtcagtgaccaacaatgctgcagagaagatcattc atctatgacagtggaacattcttacaattcaaatgacatggaaacatgggatgaggaaagtataacagaatgtgacgtag acaaggaaaatgcttatataactagtggtaaaagatcattaagtgatgagggagatgctaaaaataaacgtcaaaagaaa gaggagattacgagagtacggggtcgtagcaggcagcttacaagtcaccagactgacgtccttagtaattggtacaaaat acacatcagatatccgtatccatcagatctggaggtacagcaactgtcagaggtgacggggctcaagcagcaacaagtca agaaatggatggcaaataaacgtgtgcgaaacttcaacactctgtcaatcagtgggaaccaacatcctatcaagttcaaa ttcaaaggaaatcgtgaaagtgatgctgtaaagaatactgtaaaaccaaattatcagcagctgaaccccgaatctcgtaa aatactcaacgagtggtacaacgaccattctgatcatccgtaccctgataacgaagcaaagcaaacactagcagagaaag ctggaatatcagaggaacaagtgaaatcatggtttgctaataaaagaagtcgtgcacagaacacaaaacgacaagtgcca aattatttcatcaagaagttccctgagtatgcatctcatgtacatatggtcagtgtaggtcgtgaattagcacgcaaagc taaaagacaaaatacagaggctttgaatgccatccccggtgtatatcaatactga |
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Protein
| Protein ID | pfu_aug2.0_241.1_03857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_241.1_03857.t1 MAGPLNSTSLPYDSGSIYHYRLPFMSPASMMETAVHGTERNAYRLTANKPYGTYVDLNTDLFSPPRIEAAYLPTSPYVSP ILASVPSPICNSRPSLQELMGSNTNNQSSYLNRLYRNPMFHDLQRLLAQECLHMQVPTNLINNAWKAPPTPGLQNQEDVF SHHMKLQETFLKLRSIEKFQSEGLRIESEYSSDVGQIEVARYQALCAAGSSTSQRRAVNRHFDDKRMNLIVKCERELETM TLHEGLNNVSRTYETENENFSVQEFDSNSGFQNNKRNNKANVARQLDFLSDQHKKTKGHSDDFNEEYASAASSPECLEVD MSHDSLNDKEDSIVTDQVDVNLCDSGVCEDDSSSVISDHVSDQQCCREDHSSMTVEHSYNSNDMETWDEESITECDXLCD SGVCEDDSSSVISDHVSDQQCCREDHSSMTVEHSYNSNDMETWDEESITECDVDKENAYITSGKRSLSDEGDAKNKRQKK EEITRVRGRSRQLTSHQTDVLSNWYKIHIRYPYPSDLEVQQLSEVTGLKQQQVKKWMANKRVRNFNTLSISGNQHPIKFK FKGNRESDAVKNTVKPNYQQLNPESRKILNEWYNDHSDHPYPDNEAKQTLAEKAGISEEQVKSWFANKRSRAQNTKRQVP NYFIKKFPEYASHVHMVSVGRELARKAKRQNTEALNAIPGVYQY |
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