Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_238.1_27094
Locus scaffold238.1 : 321386 ... 356979 : -
To GenomeBrowser scaffold238.1:321386..356979
Genes list of scaffold scaffold238.1
Synonym pfu_aug1.0_9189.1_02720

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_238.1_27094.t1 gi|524880457|ref|XP_005096892.1| PREDICTED: transient receptor potential cation channel subfamily M member 7-like, partial [Aplysia californica] 0.0
pfu_aug2.0_238.1_27094.t1 gi|260787449|ref|XP_002588765.1| hypothetical protein BRAFLDRAFT_125632 [Branchiostoma floridae] 0.0
pfu_aug2.0_238.1_27094.t1 gi|524883315|ref|XP_005098290.1| PREDICTED: uncharacterized protein LOC101850169 [Aplysia californica] 0.0

Transcript
Transcript IDpfu_aug2.0_238.1_27094.t1
Definition-
>pfu_aug2.0_238.1_27094.t1
atgactagaatgtttttggatggagagcagttgcaagagggggatcgatttgatccccgcgttttgtacataccaatgtt
cagcagtagtagctcaacaacttacggtggtgctccgttagcctcaagtaccgtcggagccagtagttccagctcagtgg
tgcagaaacagtcgagtaacgagctagtagtacggaccatcacaccggagatatcaccaggcaggaacaaacatggctca
actggacagttacactttgaaatgggctcacacccatctattcagaaagctgactcacttctggatttccatgcgagtaa
aattcagcacatggagagagaagagtcgtttgcttatgtcgtggacgacaaccagcggaccattaactctatgggtggta
tatctaccgacacacaggacagcgctcgatacgaagacgcacccttcccttgcggaaatattcagtttggaagtagtgaa
tctgcattgctagacatggagccaaagaagcattatgtcaccattaactatgacacgtactgtgaggaagtatcccactt
catgggtgcatactggagaatgcgcagtccaaagatagtagtctcagtgatttcaggggtcaaacatttcaaaggctgga
aaaacaaacatctacggaaacagtttcaaagaggaattataaaggcagccaatacaacagaaatgtggatcattaccaat
ggtgtagattctggagtatcaaagatgataggggaagctattcaggaggaaaaggagcgtcgccttagtaaccgtacaca
aatgtcggagtttagacctgacgaggttcagaaatccacaaagctaactctcattggaattgtgccgaaaaatggcatca
agtatggaaatgtcttcaacggaacggatggagtgatgattaagaatgaagggagtgccacggcatcaaaggagcaagag
ctgaaccctgaccacacccattttattatcgtggatgatgtcgaagacagggaacatttactgttcaccaatctgaagtg
ctctatagaacagcaacttcagtatagtgtcggaaagccgaggagaatcaaaaggctcttcagttttggtgagaaagtaa
acagaaatagatggcgtgaacaactacataaagatttacagcttttgttagattggaatagaccagacctggcagagagt
gaggtgtttcagagagaggaatggggaagaattaagatcaacaagcacctgtttgagcagtctttactgaagcaggacag
agaggagtttgttaatatcttcctcgaccaaggcgtacaagtacacaagtatctaaaccataagaagctgaagtttttat
ttgagagggcagaagaaagggaatttttcaccagtgtctgcatgggaaaagtacttggaaaagaaatggctcaggaccag
agtttggaccagaatttcatcgtaacagacttgaacagacttctgtataaactagccggaatccaagacttggtacagcc
gtatgaactctcaatgaattctgtcggtttgtacgtccttgacccaattgtagcagaaagaaaggctatgaactgtctca
tcatttgggctgtgttgatgaatagatgtaaacttgccaaggctctgtggaacaggtgtgaagagccgatagccgtagca
ttgttatgtagtaatatgtacagggagctgtctaaagtacagatggagctttatctacgaacagaactggaagaaaatgc
tcaggattttggaaagatggctttaggagtactagagataggatacagagattccagcgctcaggcctataccatgctcg
gctctaagctgccggatttcaacaataagactgtgatacagatagcacatgatgccaactatctgagctttatcgctcat
ccttgctgtcagaaatggattactcgtaaattatttggaccaatcagtgtgaaggaattggactggggctttttgaggtt
acctgattggttcaagatcctagctagtgtcttccttatctttcctatgttaatctggatatcatttgagccgaaaatca
gccagaaaaaaagcaggaagttgaaaatgaactcatctatgttgatgaatgaagactcggatgaatctgatagttcagaa
gaggaaaatttacctgcctccaaatcaatgctggaaactgaacttaaaaagatgaaaaagaagaatgagatcaagatccg
gctgaagagtgtattaaaagacaaggctcagggtcataaactaccattctataaacagatacagttactgtggtcatctc
ctctcaccaagttctggcttactcagacattttatttcctgttcctgggtctattctgcttggccaccttatggccaacg
tgtgggaacttgtatctggacatagtactatggctatggaccgctactatccttattgaacttatacgtaggacctactt
caaatatcaggcctatgtaaacaaaggagggatgcttctaggagcactggtcgagattgtgataatgatggccttcttgt
ttttctacctcttcctacggatcattccacactggcacaagtatggggatatcatattctctaagacagtactgagcttg
gcactgatattcttcttctatagactattagggacctatttacctatatcacctagtctcggacccatgcttgtccgaat
gaaaagaatgattaagggagattttgtagtgtttgtgcggatgtttctgatattcctgatttctggaggtgtaactatcc
aagcagtgctctaccctaattttcccctgaacaaggagcttatacgtagagttcttactaggccgctattcagcatgttc
attacaccagtggatgatttgagtggatttgattgcactagtcattatgtgaatgtgacaccaagtttttgtgccagcga
ggtgttccagtcagggggttcccatatgtataacacagagcctttaatagagcccatacagaagtgtccatattccagtt
tcttcggctatgttgtcacaattcagtaccttctcatatgtaaactggtgttggtcactttactgtttgcaatgtttgcg
ttaacaattgccaaagttgacaacatagccagtgatatttggaagtttcagcgttatgccctggtggtggagtttgaaca
acgtttgattttcccaccgccttttacaatcctgtactatttttatatcctcatcatgtggtttgttaatagaatcagag
gttgtcgtagagcctgtttaggccgctgtcatcataaagattcaaagcaagatccggagatgagtcacggtgtgacgaag
cagaaacgttcccagaattataactactggaagcagtgctcaatagaatataatacaaaagaacagactgtgaagaaaga
ggaaaacttcccaaaacaacaagctgcagtgatcaacaacatacaggatgacatgagatttcagaagaaaaatatcaaaa
ggctgaacgagaggatattagagttagagagaaccatctcaaccagtagaatgtacctagaaagtatcttccacaagcta
gacaaaacaggtgaacaaacctatgacatttatgatcccaaggtttacaccaagtccaaagatcagttcaatgaagatga
aatcatctatgtggatgaagacttgatagagttgctgaagcttaaacaagaaagagaacttttgagtgaggaggaattgg
cagagttaccacccttgcccttattttctcccaaatggaatgcgttggtatcaaagaagtcaggaatagatctgacaagg
gtgatagacagaaggtcatggatttctctagataaccagccattacgatacaacattgatgccgctggtttaccaattac
atgtacaggcaagtacactacctataaatcactttttcagttctttgcacaatttgcaatggcaaatgccaataccaaag
tgtcgttttccatggatgtacctaccccctctgcgtccaccaccatgcctgtcctccaagggtcgaagacaagtctacgg
acggacgtagattccaacggtttcagtgcctgtctcttatacaaagggtatgtagatgacccacgtaacacagacaatgc
ctgggttgaggcagaggtgtggaatttccactatgacctgtctgattcctttgatatcagaataccggaggattatagtg
taacatggaaagaggtgtctccaaatgttaaactcttcggaaatgaaggagcaattgttcaagaagctgcaagaatccat
gatgcttatcactga

Protein
Protein IDpfu_aug2.0_238.1_27094.t1
Definition-
>pfu_aug2.0_238.1_27094.t1
MTRMFLDGEQLQEGDRFDPRVLYIPMFSSSSSTTYGGAPLASSTVGASSSSSVVQKQSSNELVVRTITPEISPGRNKHGS
TGQLHFEMGSHPSIQKADSLLDFHASKIQHMEREESFAYVVDDNQRTINSMGGISTDTQDSARYEDAPFPCGNIQFGSSE
SALLDMEPKKHYVTINYDTYCEEVSHFMGAYWRMRSPKIVVSVISGVKHFKGWKNKHLRKQFQRGIIKAANTTEMWIITN
GVDSGVSKMIGEAIQEEKERRLSNRTQMSEFRPDEVQKSTKLTLIGIVPKNGIKYGNVFNGTDGVMIKNEGSATASKEQE
LNPDHTHFIIVDDVEDREHLLFTNLKCSIEQQLQYSVGKPRRIKRLFSFGEKVNRNRWREQLHKDLQLLLDWNRPDLAES
EVFQREEWGRIKINKHLFEQSLLKQDREEFVNIFLDQGVQVHKYLNHKKLKFLFERAEEREFFTSVCMGKVLGKEMAQDQ
SLDQNFIVTDLNRLLYKLAGIQDLVQPYELSMNSVGLYVLDPIVAERKAMNCLIIWAVLMNRCKLAKALWNRCEEPIAVA
LLCSNMYRELSKVQMELYLRTELEENAQDFGKMALGVLEIGYRDSSAQAYTMLGSKLPDFNNKTVIQIAHDANYLSFIAH
PCCQKWITRKLFGPISVKELDWGFLRLPDWFKILASVFLIFPMLIWISFEPKISQKKSRKLKMNSSMLMNEDSDESDSSE
EENLPASKSMLETELKKMKKKNEIKIRLKSVLKDKAQGHKLPFYKQIQLLWSSPLTKFWLTQTFYFLFLGLFCLATLWPT
CGNLYLDIVLWLWTATILIELIRRTYFKYQAYVNKGGMLLGALVEIVIMMAFLFFYLFLRIIPHWHKYGDIIFSKTVLSL
ALIFFFYRLLGTYLPISPSLGPMLVRMKRMIKGDFVVFVRMFLIFLISGGVTIQAVLYPNFPLNKELIRRVLTRPLFSMF
ITPVDDLSGFDCTSHYVNVTPSFCASEVFQSGGSHMYNTEPLIEPIQKCPYSSFFGYVVTIQYLLICKLVLVTLLFAMFA
LTIAKVDNIASDIWKFQRYALVVEFEQRLIFPPPFTILYYFYILIMWFVNRIRGCRRACLGRCHHKDSKQDPEMSHGVTK
QKRSQNYNYWKQCSIEYNTKEQTVKKEENFPKQQAAVINNIQDDMRFQKKNIKRLNERILELERTISTSRMYLESIFHKL
DKTGEQTYDIYDPKVYTKSKDQFNEDEIIYVDEDLIELLKLKQERELLSEEELAELPPLPLFSPKWNALVSKKSGIDLTR
VIDRRSWISLDNQPLRYNIDAAGLPITCTGKYTTYKSLFQFFAQFAMANANTKVSFSMDVPTPSASTTMPVLQGSKTSLR
TDVDSNGFSACLLYKGYVDDPRNTDNAWVEAEVWNFHYDLSDSFDIRIPEDYSVTWKEVSPNVKLFGNEGAIVQEAARIH
DAYH

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495