Gene
| Gene Model ID | pfu_aug2.0_2351.1_05498 |
|---|---|
| Locus | scaffold2351.1 : 57663 ... 89915 : - |
| To GenomeBrowser | scaffold2351.1:57663..89915 |
| Genes list of scaffold | scaffold2351.1 |
| Synonym | pfu_aug1.0_7791.1_38647 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2351.1_05498.t1 | 1 | 1 | Reeler | 27 | 152 | 1.1e-23 | 83.8 | 2.4e-27 | 1.8e-23 | 83.2 |
| pfu_aug2.0_2351.1_05498.t1 | 2 | 1 | DOMON | 100 | 120 | 3.7e-16 | 59.1 | 0.61 | 4500.0 | -2.5 |
| pfu_aug2.0_2351.1_05498.t1 | 2 | 2 | DOMON | 216 | 331 | 3.7e-16 | 59.1 | 1.2e-19 | 8.9e-16 | 57.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2351.1_05498.t1 | gi|676477166|ref|XP_009061026.1| | hypothetical protein LOTGIDRAFT_165756 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2351.1_05498.t1 | gi|507560568|ref|XP_004663989.1| | PREDICTED: ferric-chelate reductase 1 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_2351.1_05498.t1 | gi|625244730|ref|XP_007613614.1| | PREDICTED: ferric-chelate reductase 1 isoform X2 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_2351.1_05498.t1 | gi|674051350|ref|XP_008831923.1| | PREDICTED: ferric-chelate reductase 1 [Nannospalax galili] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2351.1_05498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2351.1_05498.t1 atgattttcagcaggataatcttagtcctcacattgctccacacaagtgaagaatatcccagcggtgcacccagcacagc atgtcctggcatgttacctcaacacgatgctgaacctcagtcgtctccagcaccctatactatacaagtatcatcggagt ctcttacctttgatgataatttgacagtcaatgtgtcagctgtcaatggtaccttcaaaggttttcttgtacgagctgta gaagcgtcgctgacaggacctgactatgttgttggatcgttcgtgccttcatctccggattccaaactaacttgtgataa ccaagatgggataacccatacaagtgcagaagaaaaagagtctgtttcgtttagatggaaaccaaagacaagtttaaaag ttaaaataatgtttatagcaacagttgttcaagagttttcgacgttctggatgaacatctcttcagacatggttgatgtc aattatacagttcctgaccatttgatcacgacagaatcaatcaacaattcatcaatggaacctattacaaccagtctgcc tccatcaagcagtgtgacacctgcaactagtccacaatgtcaaaaaggtaggggctgctttaaggcaggatgtagtgacg gggtatgtgatgcagtggtgatgtggaacaggaaaggagactttgtctttttcgatatcatatcaaggaatcaagttggg cagaacagatggaaagccattggattctcaaaaactgggaaaatggcagatacaagtgttattatgtgcttatttggaac tcaagtcactgcagagataggatacaacgaccattacaactttgaagttgtgaaggaggatagtggctgtttaacatctg tcagtgggaggaatgaggatggtttagagacttgtagttttcgacgaagaatcaattccactacatctccagacaaaatt ttcactttatacgaaaaatattatcttttactaggaacaggaaaaatagaaggcggttttccaacacagcatgaagacac cccttttgtcagcagttcacaagtggactttttgaaaacaggagaaattaatggcgacgtttccgtgcccattaatatca aaatacatggatcattaatggttttggcctggatcttttgctccagtctaggaatagtggtagctcggtattgtaaagat gaatggccaaactctaaaccttggggaatcaaaatgtggttccatatacatagaacatcaatgatctcggtcttcgtggt tacagcttcatctttcatactcatatttgtagaattagatggactaaaattacagatagatgttccctcagatatagctt attcagccaaacatccaatcttagggataactgtgatggcactaaccgttatcaatctgtga |
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Protein
| Protein ID | pfu_aug2.0_2351.1_05498.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2351.1_05498.t1 MIFSRIILVLTLLHTSEEYPSGAPSTACPGMLPQHDAEPQSSPAPYTIQVSSESLTFDDNLTVNVSAVNGTFKGFLVRAV EASLTGPDYVVGSFVPSSPDSKLTCDNQDGITHTSAEEKESVSFRWKPKTSLKVKIMFIATVVQEFSTFWMNISSDMVDV NYTVPDHLITTESINNSSMEPITTSLPPSSSVTPATSPQCQKGRGCFKAGCSDGVCDAVVMWNRKGDFVFFDIISRNQVG QNRWKAIGFSKTGKMADTSVIMCLFGTQVTAEIGYNDHYNFEVVKEDSGCLTSVSGRNEDGLETCSFRRRINSTTSPDKI FTLYEKYYLLLGTGKIEGGFPTQHEDTPFVSSSQVDFLKTGEINGDVSVPINIKIHGSLMVLAWIFCSSLGIVVARYCKD EWPNSKPWGIKMWFHIHRTSMISVFVVTASSFILIFVELDGLKLQIDVPSDIAYSAKHPILGITVMALTVINL |
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