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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_233.1_10477
Locus scaffold233.1 : 169346 ... 170235 : +
To GenomeBrowser scaffold233.1:169346..170235
Genes list of scaffold scaffold233.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_233.1_10477.t1 gi|17566580|ref|NP_505242.1| ZC178.1 [Caenorhabditis elegans] 3.0e-15
pfu_aug2.0_233.1_10477.t1 gi|308501162|ref|XP_003112766.1| hypothetical protein CRE_30924 [Caenorhabditis remanei] 2.0e-13
pfu_aug2.0_233.1_10477.t1 gi|308456970|ref|XP_003090892.1| hypothetical protein CRE_05281 [Caenorhabditis remanei] 2.0e-08
pfu_aug2.0_233.1_10477.t1 gi|573965113|ref|XP_006664676.1| PREDICTED: probable polyamine transporter At3g19553-like [Oryza brachyantha] 4.0e-06

Transcript
Transcript IDpfu_aug2.0_233.1_10477.t1
Definition-
>pfu_aug2.0_233.1_10477.t1
atggacaatcacacaagatacatcaaagggctaaggaagaccaaacttgaaaacacagaatggacaatcacaacaagata
caacaaagggtcatggaagactaaacacgaaaagatagactggacaatcacaacaagagacaccaaagggtcaaggagga
ccaaacacgaaaacacagagtggacaatcacaacaagagacaccaaagggtcgaggaagaccaaacacgaaaacatagag
tggacaattacaacaagagacatcaaaggttcgaggaagttcaaacacgaaaacatagagtggacaatcacaacaagaga
caccaaagggacaaggaacaccaaacttgaaaacacagaatggacaatcacaacaatagacaacaaagggtcaaggaaga
ccaaaaacgaaaacatagagtggacaatcacaacaagagacatcaaagggtcaaggaagaccaaacacgaaaacacagaa
tggacaatcacaacaagagacaacaacgggttaaggaagcccaaacacgaaaacattgagtggacaatcgcaacaagata
caacaaaggggcaagaaagaccaaacatcaaagacgaagtccaaatactaaacacaaaaggcttcacataaaccaaacgg
tgtcggcttag

Protein
Protein IDpfu_aug2.0_233.1_10477.t1
Definition-
>pfu_aug2.0_233.1_10477.t1
MDNHTRYIKGLRKTKLENTEWTITTRYNKGSWKTKHEKIDWTITTRDTKGSRRTKHENTEWTITTRDTKGSRKTKHENIE
WTITTRDIKGSRKFKHENIEWTITTRDTKGTRNTKLENTEWTITTIDNKGSRKTKNENIEWTITTRDIKGSRKTKHENTE
WTITTRDNNGLRKPKHENIEWTIATRYNKGARKTKHQRRSPNTKHKRLHINQTVSA

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