Gene
| Gene Model ID | pfu_aug2.0_23.1_10131 |
|---|---|
| Locus | scaffold23.1 : 700587 ... 711318 : + |
| To GenomeBrowser | scaffold23.1:700587..711318 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_3939.1_52141 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10131.t1 | 1 | 1 | Ferritin | 33 | 178 | 2.5e-25 | 88.8 | 4.5e-29 | 3.4e-25 | 88.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10131.t1 | gi|165972411|ref|NP_001107131.1| | uncharacterized protein LOC100006523 [Danio rerio] | 3.0e-23 |
| pfu_aug2.0_23.1_10131.t1 | gi|213624866|gb|AAI71692.1| | Wu:fj24c01 [Danio rerio] | 3.0e-23 |
| pfu_aug2.0_23.1_10131.t1 | gi|189517136|ref|XP_001921731.1| | PREDICTED: ferritin, middle subunit-like [Danio rerio] | 3.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10131.t1 atgaaactgttcgttgtacttttgttggcggtcggcgcctcggccgaaattgtcagcagtgtcaatcagaagtttaaaac ccaaaccaacacagatcttaaggatcagatagttcgtgagcttcaagcaggatatttttacgatgcctactcacactact ttgccagagctgatgtcgccttatatggttttgctaaattcttcgctgctgcagctaaagaggaaaggacacatgccgag aaaatgatggagtacattaataagcgtggtggggaggtagagctgggcgatatcaagctccaagacgtttgcctggcagt ttcacaattattgcaagcatcgacgttgaccacagagaaatccgctgcttgtatttgttactttatgtccagggatgtag aaaatgttgatgcacaatgcggacttcgaagagattggtttagcgggctgatggcaatggaggacacattgatgttggag agatatgtcaaccagcaattactgaacatccatgaaaggaatgacggtgatcctcac |
|
Protein
| Protein ID | pfu_aug2.0_23.1_10131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10131.t1 MKLFVVLLLAVGASAEIVSSVNQKFKTQTNTDLKDQIVRELQAGYFYDAYSHYFARADVALYGFAKFFAAAAKEERTHAE KMMEYINKRGGEVELGDIKLQDVCLAVSQLLQASTLTTEKSAACICYFMSRDVENVDAQCGLRRDWFSGLMAMEDTLMLE RYVNQQLLNIHERNDGDPH |
|