Gene
| Gene Model ID | pfu_aug2.0_23.1_10130 |
|---|---|
| Locus | scaffold23.1 : 694032 ... 700466 : - |
| To GenomeBrowser | scaffold23.1:694032..700466 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10130.t1 | 1 | 1 | RVT_1 | 152 | 367 | 9.0e-25 | 87.2 | 9.3e-29 | 1.4e-24 | 86.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10130.t1 | gi|449669639|ref|XP_004207079.1| | 1.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10130.t1 atggtggcgatgaatggacttctggtggctctgttaggcgccgtggtggcggtggtagcgtacagagatttatatggcat cgattcgccacacaactcagcagataagatcatacagcagaattttcccagactttcacagaaaggaataaataagcaga tctcacaatgccttgattacagcttccagttccttgccatgatcttagaggacctatgtagtaaaaccaaaatcccaatc gaacctgcttctgaggatgaaatagaaaaaatcattaaaagccttaagagcaacaaagccccagactattatggacttac agctgaacatctcaaaaatgcaatacatgaggtcgttccaccaatcactcaaatcataaactcaattataaagaaggcag aggttcccgactatctaaaagttggtattttaacccccgtcctgaaaaagggaaaagagaaaactgtctcaactaactac agagggataacggtcactcccctgctgggaaaaattcttgaaaccacactaagatttaggctcgataaaatcctaggaaa ctctcagagccaactacaaagaggtttcacggaaggggtctctcccttaatggcaggccttctcattacagaggcgatag cagaagcaaaagagaatagggagaatttgattttacaaatattagatgctgaaaaagcattcgacgttgtctggcacgat agtctcctacaaaaaatgtataaagatggggtggagggggatttatggctacttgttcaatccctacataaaaatgctaa caccatagtcaagtcggagggggaaaccttaggaaatatacctatactccaaggcataagacagggcgcaaaattatcca cgcttatgtataagaggtttaataatgacctaattaaccatcttcaaaatgcaaatgagggaataaagataggaacacat gacatcagcgcaccaacgtgtgcagatgatatctctcttctcactccaaatgaggcagaagcccaaatacttaccaacct agtttatgaaacatcaagaagagatcgattcaacattaatccgagtaaatgcgaactcatatactaa |
|
Protein
| Protein ID | pfu_aug2.0_23.1_10130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10130.t1 MVAMNGLLVALLGAVVAVVAYRDLYGIDSPHNSADKIIQQNFPRLSQKGINKQISQCLDYSFQFLAMILEDLCSKTKIPI EPASEDEIEKIIKSLKSNKAPDYYGLTAEHLKNAIHEVVPPITQIINSIIKKAEVPDYLKVGILTPVLKKGKEKTVSTNY RGITVTPLLGKILETTLRFRLDKILGNSQSQLQRGFTEGVSPLMAGLLITEAIAEAKENRENLILQILDAEKAFDVVWHD SLLQKMYKDGVEGDLWLLVQSLHKNANTIVKSEGETLGNIPILQGIRQGAKLSTLMYKRFNNDLINHLQNANEGIKIGTH DISAPTCADDISLLTPNEAEAQILTNLVYETSRRDRFNINPSKCELIY |
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