Gene
| Gene Model ID | pfu_aug2.0_23.1_10127 |
|---|---|
| Locus | scaffold23.1 : 639155 ... 650396 : - |
| To GenomeBrowser | scaffold23.1:639155..650396 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_24977.1_04410 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10127.t1 | 1 | 1 | MFS_1 | 28 | 380 | 1.5e-36 | 125.8 | 3.8e-40 | 1.9e-36 | 125.5 |
| pfu_aug2.0_23.1_10127.t1 | 2 | 1 | Sugar_tr | 85 | 235 | 2.1e-13 | 49.6 | 4.2e-17 | 2.1e-13 | 49.6 |
| pfu_aug2.0_23.1_10127.t1 | 2 | 2 | Sugar_tr | 323 | 371 | 2.1e-13 | 49.6 | 1.1 | 5400.0 | -4.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10127.t1 | gi|676450757|ref|XP_009052483.1| | hypothetical protein LOTGIDRAFT_115354 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_23.1_10127.t1 | gi|524871901|ref|XP_005092721.1| | PREDICTED: major facilitator superfamily domain-containing protein 10-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_23.1_10127.t1 | gi|524871899|ref|XP_005092720.1| | PREDICTED: major facilitator superfamily domain-containing protein 10-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_23.1_10127.t1 | gi|242014698|ref|XP_002428022.1| | tetracycline-efflux transporter, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_23.1_10127.t1 | gi|556984776|ref|XP_005998243.1| | PREDICTED: major facilitator superfamily domain-containing protein 10 isoform X1 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10127.t1 atgacgtcggacgccatgaagacggagcaggacgaaggtgtccgtaaggcggagaaggaggcaaacaggacagcctatat agtcttcctctccctcattatagacctcctggcttttaccctgattctgccactgttaccatcgttactagattactatg gtactcaaaaggatggattgtacagtacaataaaggattctgtgagcagctttagggacttggtaggggcacctgacaca cccagatggaactctgtgctctttgggggtttgataggatcactattctcctttcttcaattcctggcttcccctgttat gggtgctgcctcagatgtatatgggaggaaacccgtccttgtcatctctttgattggagtagcaatgtcctatgcactat gggccatatcacgtaattttacgttatttgtatttgctcgtattgttggaggactgagtaaaggcaatgtcagtctgtct acggctgttgtagctgatatattcccacctgaaaagagaggaagaggaatggctttgataggagtggcattttccgtggg ttttgtgtttggaccacttataggagcaggattttctgtgtatgccagacagcaacaggaagctttctacaccattcctg ctctctttgccttaacattggctgtcatagatattatattcatatcattattcttcaaagaaacgttacctcaagacagg agggccaagtctatatcatcaggttggcagaaaacgtcccatctcatcaatcctatatcattattcaaattttcctccgt agaaaaaatctcaaaagcagatttgagctcgttacagcatataggcagcatttattttctatatctactgatgtactcag gtttagaatttactctgacattccttgttcataacagacttagctataatagtatgcagcaagggcgcatgttcttttac attggcacagtaatggccttagtgcaaggagggtatgtacggaggattccggcaggcaaggaaaccaaaatagccaccat gggacttacccttttgatacctgcctttataatgatggcctttgcccaaactgcttggttgatgtaccttggtctcactt tatttgcatttggcgtgttcagatcccttggggccctggctagggctttaggtccagttatcttctccacagtatattgg agctgtggtgatgtgacatgttacatatcaggagctattctcctatcggtgccatatatcatgctcagaaagctcaaagt cagctctcacaaagaataa |
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Protein
| Protein ID | pfu_aug2.0_23.1_10127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10127.t1 MTSDAMKTEQDEGVRKAEKEANRTAYIVFLSLIIDLLAFTLILPLLPSLLDYYGTQKDGLYSTIKDSVSSFRDLVGAPDT PRWNSVLFGGLIGSLFSFLQFLASPVMGAASDVYGRKPVLVISLIGVAMSYALWAISRNFTLFVFARIVGGLSKGNVSLS TAVVADIFPPEKRGRGMALIGVAFSVGFVFGPLIGAGFSVYARQQQEAFYTIPALFALTLAVIDIIFISLFFKETLPQDR RAKSISSGWQKTSHLINPISLFKFSSVEKISKADLSSLQHIGSIYFLYLLMYSGLEFTLTFLVHNRLSYNSMQQGRMFFY IGTVMALVQGGYVRRIPAGKETKIATMGLTLLIPAFIMMAFAQTAWLMYLGLTLFAFGVFRSLGALARALGPVIFSTVYW SCGDVTCYISGAILLSVPYIMLRKLKVSSHKE |
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