Gene
| Gene Model ID | pfu_aug2.0_23.1_10126 |
|---|---|
| Locus | scaffold23.1 : 623499 ... 639076 : - |
| To GenomeBrowser | scaffold23.1:623499..639076 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_2276.1_44302 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10126.t1 | 2 | 1 | EF-hand_7 | 14 | 63 | 4.3e-06 | 26.7 | 2.5e-07 | 0.00093 | 19.2 |
| pfu_aug2.0_23.1_10126.t1 | 3 | 1 | EF-hand_6 | 15 | 28 | 6.5e-07 | 28.7 | 0.47 | 1700.0 | -0.7 |
| pfu_aug2.0_23.1_10126.t1 | 3 | 2 | EF-hand_6 | 39 | 65 | 6.5e-07 | 28.7 | 3.7e-07 | 0.0014 | 18.3 |
| pfu_aug2.0_23.1_10126.t1 | 3 | 3 | EF-hand_6 | 120 | 139 | 6.5e-07 | 28.7 | 0.0017 | 6.3 | 6.9 |
| pfu_aug2.0_23.1_10126.t1 | 2 | 2 | EF-hand_7 | 120 | 135 | 4.3e-06 | 26.7 | 0.0038 | 14.0 | 5.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10126.t1 | gi|71749402|ref|XP_828040.1| | hypothetical protein [Trypanosoma brucei brucei TREU927] | 7.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10126.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10126.t1 atggaggaaaaacttgtctcagacttcgcaaagcatgcgacaaatggacgaatgggtaaaacggaagtcagaaagtttct acaatcccagaatttggatccatcagaagccttcctggaagaaattttctctgaacacgacaaagacaaaaactatgagc taaatgaagaagagttcagagcctggatgaaagataggacgcacagtttagaagaaatgcggaatttcataaaaagtagc ctggacgtcttatttcctggcgcagaaaaggtgccgattagcgaccttatggatgtgttatgtaaacggggtgatccttt caacgatttagaaagagaaaatgctctcattacgttaaaacagatggactcgaacgatgatgaccatattgataaaagag aacttggcatgtgcctttatccaaccaatggcagggagggaaataacgttcaagaaaccaatgacgagtcagtaagccag gaagcgacagaaacgcaagaaaatcagcaacttaatgaaactcaacagggaaatgatgatgtaacacaagaaacaaacca agaagtagcacaagaggattccgaaaataaagaagaaagtcaggaggaaacacaacaggaatcagaaaatcaggaggaaa cacaacaggaatcacaacaggaatcagaaaatcaggaggaaacacaacaggaatcagaaaatcaggaggaaacacaacag gaatcagataataaagaagaaaaactaggcatgtgcctttatccaaccaatggcagggagggaaataacgttcaagaaac caatgacgagtcagtaagccaggaagcgacagaaacgcaagaaaatcagcaacttaatgaaactcaacagggaaatgatg atgtaacacaagaaacaaaccaagaagtagcacaagaggattccgaaaataaagaagaaagtcaggaggaaacacaacag gaatcagaaaatcaggaggaaacacaacaggaatcacaacaggaatcagaaaatcaggaggaaacacaacaggaatcaca acaggaatcagaaaatcaggaggaaacacaacaggaatcagataataaagaagaaagtcaacaggaaacacaacaggaat cggaaaatcaggaggaaacacaacaggaaacagaacatcaagaagaaacacaacaggaatcggaaaatcaagaggaatca cagcaggaaactgaaaatcaggaagaaacacaacaggaaactgaacaacaggaagaaacacaacaggaatatggaaatca agaagacattcagcaggaaacagagaatcaagtagaaacacaacaagagtctggaaaccaggaagaaacacaacaggaat ctggaaaccaggaggaaacacaacaggaagaaacacaacaagaatctgaaaatcaggacggaacacagcaggattctgaa aatcaggagggaacacaacaggaatcgggaaatcaggagggaacacaacaggaatctgaaaatcaggaggaatcacaaca ggaaactgaaaatcaggagggaactgaaaataatcaggaagttacaaacgataataaggaagacactgacaaagaaggtc aaaaccagacacaagacgacaagactgatgagcaagttcaagatgacgctaataaagatgttactcaagagaacactgac gcatcttag |
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Protein
| Protein ID | pfu_aug2.0_23.1_10126.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10126.t1 MEEKLVSDFAKHATNGRMGKTEVRKFLQSQNLDPSEAFLEEIFSEHDKDKNYELNEEEFRAWMKDRTHSLEEMRNFIKSS LDVLFPGAEKVPISDLMDVLCKRGDPFNDLERENALITLKQMDSNDDDHIDKRELGMCLYPTNGREGNNVQETNDESVSQ EATETQENQQLNETQQGNDDVTQETNQEVAQEDSENKEESQEETQQESENQEETQQESQQESENQEETQQESENQEETQQ ESDNKEEKLGMCLYPTNGREGNNVQETNDESVSQEATETQENQQLNETQQGNDDVTQETNQEVAQEDSENKEESQEETQQ ESENQEETQQESQQESENQEETQQESQQESENQEETQQESDNKEESQQETQQESENQEETQQETEHQEETQQESENQEES QQETENQEETQQETEQQEETQQEYGNQEDIQQETENQVETQQESGNQEETQQESGNQEETQQEETQQESENQDGTQQDSE NQEGTQQESGNQEGTQQESENQEESQQETENQEGTENNQEVTNDNKEDTDKEGQNQTQDDKTDEQVQDDANKDVTQENTD AS |
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