Gene
| Gene Model ID | pfu_aug2.0_23.1_10121 |
|---|---|
| Locus | scaffold23.1 : 530966 ... 548881 : + |
| To GenomeBrowser | scaffold23.1:530966..548881 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_10199.1_53496 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10121.t1 | 2 | 1 | Transferrin | 1 | 355 | 0.0 | 381.3 | 0.0 | 0.0 | 232.0 |
| pfu_aug2.0_23.1_10121.t1 | 2 | 1 | Phosphonate-bd | 43 | 242 | 7.8e-15 | 54.9 | 1.3e-09 | 9.6e-06 | 25.1 |
| pfu_aug2.0_23.1_10121.t1 | 2 | 2 | Transferrin | 363 | 561 | 0.0 | 381.3 | 0.0 | 3.09687e-43 | 147.9 |
| pfu_aug2.0_23.1_10121.t1 | 2 | 2 | Phosphonate-bd | 402 | 491 | 7.8e-15 | 54.9 | 3.8e-10 | 2.8e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10121.t1 | gi|676450545|ref|XP_009052413.1| | hypothetical protein LOTGIDRAFT_214460 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_23.1_10121.t1 | gi|524879751|ref|XP_005096547.1| | PREDICTED: melanotransferrin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_23.1_10121.t1 | gi|675864776|ref|XP_009017948.1| | hypothetical protein HELRODRAFT_99809 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_23.1_10121.t1 | gi|260799005|ref|XP_002594490.1| | hypothetical protein BRAFLDRAFT_124962 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_23.1_10121.t1 | gi|195996497|ref|XP_002108117.1| | hypothetical protein TRIADDRAFT_52263 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10121.t1 atgcgatggtgtgtacaatcaagggaggaacagatgcattgtgaaaaatggagggtgacgttagatcaaatgatgacaga tggttctattgcaaacagacaagtcattccaaaattcacctgtgttaggggcaaagatgtgtatgagtgcatgaagcaca tccaggatgataatgctgatgtcatgtctctggatacaggacaaggatattttgccggacgttattataatatgatgcct ttccttgctgaaaaatatattgctgagacaacacttattcctggactccattattattctgtcggagtaaagagaactaa caacatattcaatgtcaggacattaaaaggcaaaaacgcctgcttcccatctattggatcagcagcaggttggagatatc caataggaactctgatggacgattcgttgtataatgtcatcaaagtctccgaatgcaatgctgtcgttaaaacagtgtca gacttctttgggaatctctgtctgcctggagctttaacatcattctacaatccatttggtaacaaccctacatcaatctg tgtacaatgtgccggtatcggtgaacagaagtgctctaccgatgacccatacgctggttatgacggtgcctttaagtgta tggcgtatgatgcaggagatatcgctttcctcagacacgatactgttgacattatgacagccaatggtgtcttccagaaa ggggattatgaattagtctgtccaaacggccttaaccagcctgtcgatagttacctgaactgtaactttggtgatattcc atccaacatggtgatgacatcatcactgaagcccaagtccatggtggacacatacaaggttttcctgaagcaggcggtga gatggtttggccccggagggccgtatgagagcagatttaagatgttcggaggcctggtgatgggatccgaccgggccaat ttactcttcacagacagtactgtgtcactggttgatgtcggcaaaaaggacacttactacagctgggtcgattccaactt ctacaaggtgatggacaacctgaatgcctgtccactactgacagccaaattgtgtgtcatatccaaacaggaaaaggcaa aatgtgaaacaatgatggctgcatttgatgccaaagatttacgaccaagcctggactgtatcaaaggctcgggagctgag gactgcatgaagaaaatctcccgaggcgatgctgacctgatggtccttgacccaggagatatatatctcgggggaaggaa atatggcctacagccgatagccatggaggactacggagacatgcagggctcattcttcagcgtggccgtagccaggaaac gggactctacaatgacactcttcaatcttaaacagaagagagcttgtttaccaggtataggtagaggtgatggttggatc ataccaatgaatatattcatagagacggaacagttcctgccacaacattgcaccttgttcgaaaacttaggtcagttatt tacacggtcttgtattcccggagccatggactatgactacaaccctaaccagaagccggtcagtctgtgtgaaggatgtg ccgcaggcggcttcagaaaatgtcagagaacaagcgaggaccagtattacggagctagtggctcattcagatgtctggtg gagaagtataagtctgagcaggacaagctgatatactggcagctcctgaactacggacagcagttcttctcctctgatat gtaa |
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Protein
| Protein ID | pfu_aug2.0_23.1_10121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10121.t1 MRWCVQSREEQMHCEKWRVTLDQMMTDGSIANRQVIPKFTCVRGKDVYECMKHIQDDNADVMSLDTGQGYFAGRYYNMMP FLAEKYIAETTLIPGLHYYSVGVKRTNNIFNVRTLKGKNACFPSIGSAAGWRYPIGTLMDDSLYNVIKVSECNAVVKTVS DFFGNLCLPGALTSFYNPFGNNPTSICVQCAGIGEQKCSTDDPYAGYDGAFKCMAYDAGDIAFLRHDTVDIMTANGVFQK GDYELVCPNGLNQPVDSYLNCNFGDIPSNMVMTSSLKPKSMVDTYKVFLKQAVRWFGPGGPYESRFKMFGGLVMGSDRAN LLFTDSTVSLVDVGKKDTYYSWVDSNFYKVMDNLNACPLLTAKLCVISKQEKAKCETMMAAFDAKDLRPSLDCIKGSGAE DCMKKISRGDADLMVLDPGDIYLGGRKYGLQPIAMEDYGDMQGSFFSVAVARKRDSTMTLFNLKQKRACLPGIGRGDGWI IPMNIFIETEQFLPQHCTLFENLGQLFTRSCIPGAMDYDYNPNQKPVSLCEGCAAGGFRKCQRTSEDQYYGASGSFRCLV EKYKSEQDKLIYWQLLNYGQQFFSSDM |
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