Gene
| Gene Model ID | pfu_aug2.0_23.1_10112 |
|---|---|
| Locus | scaffold23.1 : 341856 ... 351179 : + |
| To GenomeBrowser | scaffold23.1:341856..351179 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_14866.1_18169 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitotic checkpoint protein bub3-like | GO:0000070 GO:0000776 GO:0005515 GO:0005634 GO:0008608 GO:0051983 GO:0071173 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10112.t1 | 4 | 1 | WD40 | 4 | 35 | 5.0e-23 | 80.0 | 4.4e-07 | 0.0066 | 16.2 |
| pfu_aug2.0_23.1_10112.t1 | 4 | 2 | WD40 | 46 | 76 | 5.0e-23 | 80.0 | 9.0e-13 | 1.3e-08 | 34.3 |
| pfu_aug2.0_23.1_10112.t1 | 4 | 3 | WD40 | 142 | 168 | 5.0e-23 | 80.0 | 3.3e-09 | 4.9e-05 | 23.0 |
| pfu_aug2.0_23.1_10112.t1 | 4 | 4 | WD40 | 184 | 201 | 5.0e-23 | 80.0 | 5.4e-05 | 0.8 | 9.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10112.t1 | gi|676496965|ref|XP_009067387.1| | hypothetical protein LOTGIDRAFT_223691 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_23.1_10112.t1 | gi|291236530|ref|XP_002738187.1| | PREDICTED: mitotic checkpoint protein BUB3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_23.1_10112.t1 | gi|260826716|ref|XP_002608311.1| | hypothetical protein BRAFLDRAFT_125481 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_23.1_10112.t1 | gi|514761341|ref|XP_005023232.1| | PREDICTED: mitotic checkpoint protein BUB3 isoform X1 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_23.1_10112.t1 | gi|524865490|ref|XP_005089574.1| | PREDICTED: mitotic checkpoint protein BUB3-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10112.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10112.t1 atgcggataaagtatcaccattcggctccagtattggactgttgtttctatgatgctgttcattcttacagtggaggtct ggataatacgctgaaggtgtttgacttcaatacaaatacagagagtagcgtaggtcagcatgacgatgccattcgttgtg tggagtactgtccagaggtaaacgtagtggtcactggtagttgggattcaacggtgaaactgtgggacccgagaacacca tgtgctgcaggctctttcagtcagccagataaagtgtacacactatcagtatgtggatatgtactcagctctattgaagg tcgagtagcagtggagtacttagatcccagtccggaggtacagaagaagaagtatgcgtttaaatgtcatcgaattaaag aggagggagtggaatacatctaccctgtcaatgctatcgctttccataatctccataacacgttcgcttctggagggtcg gacggcttcgtgaacatctgggatggcttcaacaagaaacggctctgtcaattccacaaatatccaacaagcattgcctc ccttgcgtttagcccagatggcagtgtgttagcgatagcatcttcctacatgtacgagcaggacgagatagacgatattc cagaggatacgatttacatacgtaatgtcagtgaccaggaaacaaaaccaaaatcgtga |
|
Protein
| Protein ID | pfu_aug2.0_23.1_10112.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10112.t1 MRIKYHHSAPVLDCCFYDAVHSYSGGLDNTLKVFDFNTNTESSVGQHDDAIRCVEYCPEVNVVVTGSWDSTVKLWDPRTP CAAGSFSQPDKVYTLSVCGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRIKEEGVEYIYPVNAIAFHNLHNTFASGGS DGFVNIWDGFNKKRLCQFHKYPTSIASLAFSPDGSVLAIASSYMYEQDEIDDIPEDTIYIRNVSDQETKPKS |
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