Gene
| Gene Model ID | pfu_aug2.0_23.1_10110 |
|---|---|
| Locus | scaffold23.1 : 315606 ... 329335 : + |
| To GenomeBrowser | scaffold23.1:315606..329335 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_237.1_50744 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10110.t1 | 1 | 1 | Peptidase_C14 | 4 | 277 | 4.6e-19 | 69.0 | 1.1e-22 | 5.3e-19 | 68.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10110.t1 | gi|594640047|ref|XP_007173176.1| | PREDICTED: caspase-7 isoform X1 [Balaenoptera acutorostrata scammoni] | 2.0e-06 |
| pfu_aug2.0_23.1_10110.t1 | gi|683904089|ref|XP_009085425.1| | PREDICTED: caspase-7 isoform X2 [Serinus canaria] | 6.0e-06 |
| pfu_aug2.0_23.1_10110.t1 | gi|465985941|ref|XP_004265871.1| | 1.0e-05 | |
| pfu_aug2.0_23.1_10110.t1 | gi|470614265|ref|XP_004316644.1| | PREDICTED: caspase-7 isoform 1 [Tursiops truncatus] | 1.0e-05 |
| pfu_aug2.0_23.1_10110.t1 | gi|465985939|ref|XP_004265870.1| | PREDICTED: caspase-7 [Orcinus orca] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10110.t1 atgaatggggcagcgttgtttgtcggaattccagaattccagcataaagatttgtccaaacttcctgcagtgataactga tgttaagaactttaccaatgccttcaaaaagcttggtttcaactgcaggtcactgcaaaaagatgtgataaaggccaatt ttgaagatacacttgatgaagttataaaggatgttatagacaacaatagggagtacttagccctttccatatcaagtcat ggtgcagagtacctggtaagctttccccctgatgttgagacaaaaagagtccattttatatggttcaacgatggagaact aacgacacagagcatcctggatcatctgaaaaaggatgaactaaaagatgttaccaaattagtcatgatttcagcttgtc gatcaagaccagattccaagtcacaagttgataatattgaccagggggtagaaatagagcttgtagacagacaggaagat gagtacactggactttctaatgcagtaagccagagtggtgccacaccagccaacacagaacttgttttaccagatttacc acaaaacactatactatggtactcctcaccctcaggaaaatatgagtatgacagtatgggtacaggatcgtacttcgtaa acaaggtttgctctgaattgaataagataccaagttcagactcacgatcaataatggatgttatgtgtgccgtgcataaa tctctggcttcaatggaaaataaaaaaatcgttgttgaagacgagaaccgccaacctgtaaaggtctattggaaaactgt gccaagctttattcataatctgtccaaatctttcagttttattaagacataa |
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Protein
| Protein ID | pfu_aug2.0_23.1_10110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10110.t1 MNGAALFVGIPEFQHKDLSKLPAVITDVKNFTNAFKKLGFNCRSLQKDVIKANFEDTLDEVIKDVIDNNREYLALSISSH GAEYLVSFPPDVETKRVHFIWFNDGELTTQSILDHLKKDELKDVTKLVMISACRSRPDSKSQVDNIDQGVEIELVDRQED EYTGLSNAVSQSGATPANTELVLPDLPQNTILWYSSPSGKYEYDSMGTGSYFVNKVCSELNKIPSSDSRSIMDVMCAVHK SLASMENKKIVVEDENRQPVKVYWKTVPSFIHNLSKSFSFIKT |
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