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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_23.1_10107
Locus scaffold23.1 : 283866 ... 296818 : +
To GenomeBrowser scaffold23.1:283866..296818
Genes list of scaffold scaffold23.1
Synonym pfu_aug1.0_3529.1_52008

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_23.1_10107.t1 6 1 Apc3 12 45 1.2e-08 34.9 7.5 4600.0 -2.2
pfu_aug2.0_23.1_10107.t1 4 1 TPR_15 123 196 6.6e-09 35.2 4.0e-05 0.025 13.6
pfu_aug2.0_23.1_10107.t1 7 1 TPR_11 124 188 3.6e-34 116.2 1.9e-15 1.2e-12 47.2
pfu_aug2.0_23.1_10107.t1 7 1 TPR_14 124 162 7.0e-22 75.9 3.8e-05 0.024 15.2
pfu_aug2.0_23.1_10107.t1 7 1 TPR_2 125 151 8.1e-28 94.0 0.00032 0.2 11.6
pfu_aug2.0_23.1_10107.t1 7 1 TPR_1 125 151 8.5e-26 88.4 0.0016 1.0 9.0
pfu_aug2.0_23.1_10107.t1 5 1 TPR_12 126 187 1.5e-14 53.6 9.1e-07 0.00056 19.7
pfu_aug2.0_23.1_10107.t1 4 1 TPR_16 127 189 3.3e-25 88.1 1.2e-09 7.4e-07 29.6
pfu_aug2.0_23.1_10107.t1 9 1 TPR_17 128 144 4.3e-16 57.7 0.91 560.0 1.1
pfu_aug2.0_23.1_10107.t1 6 1 TPR_19 133 176 2.2e-17 63.1 4.1e-06 0.0025 18.0
pfu_aug2.0_23.1_10107.t1 7 1 TPR_6 135 151 2.9e-07 30.4 2.7 1700.0 -0.1
pfu_aug2.0_23.1_10107.t1 8 1 TPR_8 136 156 2.9e-17 61.0 0.95 590.0 0.6
pfu_aug2.0_23.1_10107.t1 6 2 Apc3 138 212 1.2e-08 34.9 2.7e-06 0.0017 18.4
pfu_aug2.0_23.1_10107.t1 4 1 TPR_9 139 198 9.3e-12 44.6 5.4e-05 0.034 14.0
pfu_aug2.0_23.1_10107.t1 9 2 TPR_17 146 176 4.3e-16 57.7 1.6e-05 0.01 15.9
pfu_aug2.0_23.1_10107.t1 7 2 TPR_2 159 189 8.1e-28 94.0 5.2e-06 0.0032 17.2
pfu_aug2.0_23.1_10107.t1 7 2 TPR_1 159 190 8.5e-26 88.4 1.6e-08 9.9e-06 24.9
pfu_aug2.0_23.1_10107.t1 8 2 TPR_8 159 190 2.9e-17 61.0 2.7e-06 0.0017 18.0
pfu_aug2.0_23.1_10107.t1 7 2 TPR_14 160 198 7.0e-22 75.9 4.9e-05 0.03 14.9
pfu_aug2.0_23.1_10107.t1 7 2 TPR_6 160 186 2.9e-07 30.4 0.016 10.0 6.8
pfu_aug2.0_23.1_10107.t1 6 2 TPR_19 168 212 2.2e-17 63.1 1.9e-08 1.2e-05 25.5
pfu_aug2.0_23.1_10107.t1 7 2 TPR_11 173 215 3.6e-34 116.2 1.5e-06 0.00092 18.8
pfu_aug2.0_23.1_10107.t1 9 3 TPR_17 180 212 4.3e-16 57.7 2.0e-05 0.012 15.7
pfu_aug2.0_23.1_10107.t1 5 2 TPR_12 188 216 1.5e-14 53.6 0.011 6.6 6.7
pfu_aug2.0_23.1_10107.t1 7 3 TPR_14 192 230 7.0e-22 75.9 0.0019 1.2 9.9
pfu_aug2.0_23.1_10107.t1 7 3 TPR_1 193 215 8.5e-26 88.4 3.9e-05 0.024 14.2
pfu_aug2.0_23.1_10107.t1 8 3 TPR_8 193 218 2.9e-17 61.0 0.21 130.0 2.7
pfu_aug2.0_23.1_10107.t1 7 3 TPR_6 193 215 2.9e-07 30.4 1.7 1100.0 0.4
pfu_aug2.0_23.1_10107.t1 7 3 TPR_2 195 216 8.1e-28 94.0 0.00018 0.11 12.4
pfu_aug2.0_23.1_10107.t1 4 2 TPR_16 195 243 3.3e-25 88.1 1.3e-06 0.00081 19.9
pfu_aug2.0_23.1_10107.t1 7 3 TPR_11 196 246 3.6e-34 116.2 1.2e-06 0.00071 19.1
pfu_aug2.0_23.1_10107.t1 4 2 TPR_9 217 246 9.3e-12 44.6 0.0044 2.7 7.8
pfu_aug2.0_23.1_10107.t1 6 3 TPR_19 219 247 2.2e-17 63.1 0.16 100.0 3.3
pfu_aug2.0_23.1_10107.t1 9 4 TPR_17 219 243 4.3e-16 57.7 0.003 1.9 8.9
pfu_aug2.0_23.1_10107.t1 7 4 TPR_11 223 288 3.6e-34 116.2 3.3e-09 2.0e-06 27.3
pfu_aug2.0_23.1_10107.t1 7 4 TPR_2 223 244 8.1e-28 94.0 0.0027 1.6 8.7
pfu_aug2.0_23.1_10107.t1 7 4 TPR_14 223 260 7.0e-22 75.9 0.038 23.0 5.9
pfu_aug2.0_23.1_10107.t1 8 4 TPR_8 226 243 2.9e-17 61.0 0.015 9.1 6.3
pfu_aug2.0_23.1_10107.t1 5 3 TPR_12 226 287 1.5e-14 53.6 2.7e-05 0.017 15.0
pfu_aug2.0_23.1_10107.t1 7 4 TPR_1 229 243 8.5e-26 88.4 0.0092 5.7 6.7
pfu_aug2.0_23.1_10107.t1 6 3 Apc3 229 275 1.2e-08 34.9 0.03 19.0 5.4
pfu_aug2.0_23.1_10107.t1 7 4 TPR_6 230 244 2.9e-07 30.4 0.4 250.0 2.4
pfu_aug2.0_23.1_10107.t1 4 2 TPR_15 233 291 6.6e-09 35.2 0.13 83.0 2.0
pfu_aug2.0_23.1_10107.t1 4 3 TPR_16 236 290 3.3e-25 88.1 0.00012 0.075 13.7
pfu_aug2.0_23.1_10107.t1 6 4 TPR_19 237 290 2.2e-17 63.1 0.056 35.0 4.8
pfu_aug2.0_23.1_10107.t1 4 1 DnaJ 257 267 5.8e-22 77.1 7.3 4500.0 -2.6
pfu_aug2.0_23.1_10107.t1 7 5 TPR_2 258 290 8.1e-28 94.0 6.6e-06 0.0041 16.9
pfu_aug2.0_23.1_10107.t1 7 5 TPR_14 258 290 7.0e-22 75.9 0.0026 1.6 9.5
pfu_aug2.0_23.1_10107.t1 8 5 TPR_8 258 290 2.9e-17 61.0 3.6e-05 0.022 14.5
pfu_aug2.0_23.1_10107.t1 9 5 TPR_17 259 276 4.3e-16 57.7 2.2 1300.0 0.0
pfu_aug2.0_23.1_10107.t1 7 5 TPR_6 259 289 2.9e-07 30.4 0.053 33.0 5.2
pfu_aug2.0_23.1_10107.t1 6 4 Apc3 262 288 1.2e-08 34.9 3.2 2000.0 -1.0
pfu_aug2.0_23.1_10107.t1 4 3 TPR_9 265 291 9.3e-12 44.6 4.0 2500.0 -1.6
pfu_aug2.0_23.1_10107.t1 7 5 TPR_1 266 290 8.5e-26 88.4 0.032 20.0 5.0
pfu_aug2.0_23.1_10107.t1 9 6 TPR_17 281 290 4.3e-16 57.7 1.3 820.0 0.6
pfu_aug2.0_23.1_10107.t1 4 3 TPR_15 294 377 6.6e-09 35.2 0.00088 0.55 9.2
pfu_aug2.0_23.1_10107.t1 4 2 DnaJ 295 335 5.8e-22 77.1 0.18 110.0 2.6
pfu_aug2.0_23.1_10107.t1 8 6 TPR_8 316 329 2.9e-17 61.0 8.6 5300.0 -2.4
pfu_aug2.0_23.1_10107.t1 7 5 TPR_11 321 372 3.6e-34 116.2 0.047 29.0 4.3
pfu_aug2.0_23.1_10107.t1 6 5 Apc3 330 400 1.2e-08 34.9 7.2e-05 0.045 13.8
pfu_aug2.0_23.1_10107.t1 9 7 TPR_17 336 360 4.3e-16 57.7 2.2 1300.0 0.0
pfu_aug2.0_23.1_10107.t1 7 6 TPR_2 343 373 8.1e-28 94.0 1.0 620.0 0.7
pfu_aug2.0_23.1_10107.t1 7 6 TPR_1 348 373 8.5e-26 88.4 0.33 210.0 1.7
pfu_aug2.0_23.1_10107.t1 7 6 TPR_6 350 373 2.9e-07 30.4 9.5 5900.0 -1.9
pfu_aug2.0_23.1_10107.t1 7 6 TPR_11 351 405 3.6e-34 116.2 7.4e-09 4.6e-06 26.1
pfu_aug2.0_23.1_10107.t1 7 6 TPR_14 351 378 7.0e-22 75.9 0.028 17.0 6.3
pfu_aug2.0_23.1_10107.t1 4 4 TPR_9 351 411 9.3e-12 44.6 6.6e-07 0.00041 20.1
pfu_aug2.0_23.1_10107.t1 4 4 TPR_16 353 405 3.3e-25 88.1 7.0e-08 4.3e-05 24.0
pfu_aug2.0_23.1_10107.t1 6 5 TPR_19 353 412 2.2e-17 63.1 1.0e-07 6.4e-05 23.2
pfu_aug2.0_23.1_10107.t1 6 6 Apc3 355 428 1.2e-08 34.9 3.0e-05 0.019 15.1
pfu_aug2.0_23.1_10107.t1 9 8 TPR_17 367 396 4.3e-16 57.7 0.00073 0.45 10.8
pfu_aug2.0_23.1_10107.t1 7 7 TPR_11 376 413 3.6e-34 116.2 4.7e-07 0.00029 20.4
pfu_aug2.0_23.1_10107.t1 7 7 TPR_2 376 408 8.1e-28 94.0 5.7e-08 3.5e-05 23.3
pfu_aug2.0_23.1_10107.t1 7 7 TPR_1 376 408 8.5e-26 88.4 2.0e-08 1.3e-05 24.6
pfu_aug2.0_23.1_10107.t1 7 7 TPR_14 376 415 7.0e-22 75.9 1.7e-06 0.001 19.4
pfu_aug2.0_23.1_10107.t1 5 4 TPR_12 376 404 1.5e-14 53.6 0.00024 0.15 12.0
pfu_aug2.0_23.1_10107.t1 7 7 TPR_6 376 403 2.9e-07 30.4 0.0036 2.2 8.9
pfu_aug2.0_23.1_10107.t1 4 4 TPR_15 377 415 6.6e-09 35.2 0.00097 0.6 9.1
pfu_aug2.0_23.1_10107.t1 8 7 TPR_8 378 407 2.9e-17 61.0 1.9e-05 0.012 15.3
pfu_aug2.0_23.1_10107.t1 9 9 TPR_17 398 408 4.3e-16 57.7 8.5 5300.0 -1.9
pfu_aug2.0_23.1_10107.t1 8 8 TPR_8 406 421 2.9e-17 61.0 5.0 3100.0 -1.6
pfu_aug2.0_23.1_10107.t1 5 5 TPR_12 407 424 1.5e-14 53.6 2.3 1400.0 -0.8
pfu_aug2.0_23.1_10107.t1 4 3 DnaJ 409 428 5.8e-22 77.1 0.92 570.0 0.3
pfu_aug2.0_23.1_10107.t1 6 6 TPR_19 415 429 2.2e-17 63.1 2.0 1300.0 -0.2
pfu_aug2.0_23.1_10107.t1 4 4 DnaJ 429 493 5.8e-22 77.1 9.4e-25 5.8e-22 77.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_23.1_10107.t1 gi|524887498|ref|XP_005100334.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Aplysia californica] 0.0
pfu_aug2.0_23.1_10107.t1 gi|676490979|ref|XP_009065445.1| hypothetical protein LOTGIDRAFT_151060 [Lottia gigantea] 0.0
pfu_aug2.0_23.1_10107.t1 gi|675850730|ref|XP_009010925.1| hypothetical protein HELRODRAFT_185263 [Helobdella robusta] 0.0
pfu_aug2.0_23.1_10107.t1 gi|558192428|ref|XP_006129695.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Pelodiscus sinensis] 0.0
pfu_aug2.0_23.1_10107.t1 gi|556983948|ref|XP_005997981.1| PREDICTED: dnaJ homolog subfamily C member 3-like [Latimeria chalumnae] 0.0

Transcript
Transcript IDpfu_aug2.0_23.1_10107.t1
Definition- 
>pfu_aug2.0_23.1_10107.t1
atgtccacatcatcactaattgtgataaaatctacgatgcggaagaataaacacaagtcgtgccctgaagactcacaaca
acctttaaaatcacataaaacactgaccaaggaattcataatggcattacattgtatatatgaggggttgaacagagtga
aggggaggaaaaggggcgagaggagagtgagagagaaagtaggagggagggaaaggggaaaaaggggagggaggtggaaa
aggggtcggaggagggagggagggcccttaggggcgggaggagagggagaggggtggggggaagttaacggaagggtgaa
aaggaggggatgggaggggggaggaattgaaggcgctagtagtgaagttgagcagcatttagaactagggaagaaacttt
tagcagctgggcaattggcagatgccctacagcactaccatgcagctgtcgatggggacccatcaaattacctgacatat
tttagaagagccacagtttatttagcgttaggcaaatctaaatctgctcttccagatttacagaaagtcatcgaattaaa
accagattttacagctgcaagaatgcagagggccaatgttctgatgaagcagggtagattaacagaagccgaaaaagatt
atgtagaaatagtttccccttgggatccagaattacatgaaacacgagccgagtgctacgagtctataggtgaatacgcc
aaagccataacggaaatccgaccaacgacttcattacgcaacgataataggaaagcatatttcaaaatgagtatactaca
ctacgatctaggggaagccgatgaatctttgatacaaatccgtgagtgccttaaactagatcctgatgacaaaaactgtt
acccacactacaaaaaagtcaagaagttagtgaagctattacagtcagcccaggaagcgaaaaacgagaagagatgggaa
gattgccttaataaagctactcagatcctgaaaacggagatgaaagtagatttctataaaatgaaagctaactcatatca
atgtcattgccactctcaggcaggaaatacaaaagatgcattccagatgtgtaattatatattagatcgttcaccagaag
atatggatgccctgatggacagggcggagacttatctcggaaacgatcagtttgatgaagctataaaagactatcagaaa
gctgtgaatatagacggtgataatagacgagcccaggaggggcttaacaaagctcaaaaattactcaaacagtccaaaaa
gagagattattataaaatattaggagtaaaaagaactgctactactaagcagattaagagtgcatataagaaattggcag
ctaaatggcatccagacaaatataaaggagaggaaaaatctctagcagagaagaaattcatagatatagcagcagctaaa
gaagtattaacagataaagaaaaacgagctaaatttgatagcggtgaagacccacttgatccagaacaacaacagggtgg
tggtggaccgttctggcaccaaggatttaatccattcggaggaggaggaggtggtggattccagttcaaattccactttt
aa

Protein
Protein IDpfu_aug2.0_23.1_10107.t1
Definition- 
>pfu_aug2.0_23.1_10107.t1
MSTSSLIVIKSTMRKNKHKSCPEDSQQPLKSHKTLTKEFIMALHCIYEGLNRVKGRKRGERRVREKVGGRERGKRGGRWK
RGRRREGGPLGAGGEGEGWGEVNGRVKRRGWEGGGIEGASSEVEQHLELGKKLLAAGQLADALQHYHAAVDGDPSNYLTY
FRRATVYLALGKSKSALPDLQKVIELKPDFTAARMQRANVLMKQGRLTEAEKDYVEIVSPWDPELHETRAECYESIGEYA
KAITEIRPTTSLRNDNRKAYFKMSILHYDLGEADESLIQIRECLKLDPDDKNCYPHYKKVKKLVKLLQSAQEAKNEKRWE
DCLNKATQILKTEMKVDFYKMKANSYQCHCHSQAGNTKDAFQMCNYILDRSPEDMDALMDRAETYLGNDQFDEAIKDYQK
AVNIDGDNRRAQEGLNKAQKLLKQSKKRDYYKILGVKRTATTKQIKSAYKKLAAKWHPDKYKGEEKSLAEKKFIDIAAAK
EVLTDKEKRAKFDSGEDPLDPEQQQGGGGPFWHQGFNPFGGGGGGGFQFKFHF

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