Gene
| Gene Model ID | pfu_aug2.0_23.1_10102 |
|---|---|
| Locus | scaffold23.1 : 201546 ... 243446 : + |
| To GenomeBrowser | scaffold23.1:201546..243446 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_19961.1_33058 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10102.t1 | 2 | 1 | IQ | 61 | 79 | 7.8e-10 | 37.5 | 7.4e-09 | 3.7e-05 | 22.9 |
| pfu_aug2.0_23.1_10102.t1 | 2 | 2 | IQ | 136 | 150 | 7.8e-10 | 37.5 | 1.2e-05 | 0.06 | 13.0 |
| pfu_aug2.0_23.1_10102.t1 | 3 | 1 | SCHIP-1 | 172 | 212 | 0.0 | 167.0 | 3.0 | 15000.0 | -5.3 |
| pfu_aug2.0_23.1_10102.t1 | 3 | 2 | SCHIP-1 | 442 | 478 | 0.0 | 167.0 | 3.0 | 15000.0 | -5.1 |
| pfu_aug2.0_23.1_10102.t1 | 3 | 3 | SCHIP-1 | 672 | 896 | 0.0 | 167.0 | 0.0 | 0.0 | 167.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10102.t1 | gi|642924594|ref|XP_008194356.1| | PREDICTED: schwannomin-interacting protein 1-like [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_23.1_10102.t1 | gi|675868240|ref|XP_009019680.1| | hypothetical protein HELRODRAFT_188645 [Helobdella robusta] | 2.8026e-45 |
| pfu_aug2.0_23.1_10102.t1 | gi|562875525|ref|XP_006165566.1| | PREDICTED: schwannomin-interacting protein 1-like isoform X1 [Tupaia chinensis] | 1.00053e-42 |
| pfu_aug2.0_23.1_10102.t1 | gi|632934852|ref|XP_007886664.1| | PREDICTED: schwannomin-interacting protein 1 isoform X4 [Callorhinchus milii] | 1.99965e-42 |
| pfu_aug2.0_23.1_10102.t1 | gi|632934854|ref|XP_007886672.1| | PREDICTED: schwannomin-interacting protein 1 isoform X5 [Callorhinchus milii] | 4.99983e-42 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10102.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10102.t1 atggagggatcagagtttgctgacctgatggtggagggtgacacctccctagactccccagatctcacacaggagaggtt agacagactggaaagaaacagacttgtcatgaaagctctggatgcaggaattaccaacagactttacccacagaaaacgg aggtgaaaaatgaggaggaccgagctgccatcatgattcagaagaacttccgaggctacatggatcgcaagaaatatatc gagttactctttcaacaatttacagaggaggaagaaaaacagaaaaataaaacagagaaacagatggaagaaggagagct gcttgtagagaaccatcagttagaagttttgctagatgataacacgacgaccaggaggaataaagcgaggcattatctga gtgacgtcatcaccattcaaagagcctggaggacctacgtcagacggaaaagcgaacatacatcaacaggtgaaatagac gacactgagaaggatcgcgatacagaaaagggaatcaaagcctcgtctagtaaatctctacagacctccaataaaaattc ttgtgacatcgaaaaagcatcatttgtaaatgaccggaccatttctacttcggattttaagctggaagacaatgataaaa acgcgatccgatcagcagccgacagcagcacggaatttgaagtggcagacgacaatgtgagaattgtcatagagggttgt gaaaaggacaaggacagattggtgaaagaaactcaatctgtagacagtctctcgggactgagtgactcaacccctgagga aaatactcagcaccgcacccatgactccaccccagaagatgatagggtatatctagggtatgaaaacagcaaacaacacg tactcaacaaactaaagcaggatagtgatgcggattgtgtttccatcgcatccgattattctgaagtgtctgttccatta cgggaattagcagaaagtgaagtagaaatagtgcaaaaagccgatctggcggacaaaagctttgttccgagttctacagc aaattcagctattcagagaaatccagaagaaaccgatgaagagtttagcaaacgtgtccgtaagatcaacttactgagta ttgcacaggaattcgcagatttgaagaaagtaaacgcaaaagctcttccattcggactgcacaaaagctacattgaaggt gaaagttcaagtagtggggaaagttcaaggcagtcgtcagaaatgaatacacccagtgacccttcgattacttttaacga taatgacataaccagaggttgtaaaaatcaaagaggggatttgaactcaaatatttctgaaaataattcactgaaatcca agaaaaattcaaattccaagaaaaatgataatgacaaaagcacagtagatgggtctgaaaatgatggcgattttgatgtg tataatattgagacggcagtgccaaacatggactgggaggcgcttgaacgacagctacaactagccactcaggaagagca gaccagacagaagagtctacggaaaaagaattctgagtatgaggaggaggcgagacccgaggttcaacctcaggaaacta tgatagacaatgtagaacctataaatttggatttctcggaaagggacttgattccttatccggattatagtgagaaaagc tttcctttctacaagacgaagtgtaaatcagaaagtgaaatagacgacaaattgaaaataacgtcgaagttactagaaaa cgacgacgacatgatttctagtcattgttccgaaaagtttatagattctttagaggatgatgaatttttcgatgattttg acgagtttgatggaggtttgagtactaggttgaatttttcatcaaatcctgagtttagtagactgtattttgacagtggc agtgtggaaaatagtccaaagttaaagaagaaaattcaatttgagactatagtaaagcctcttgaagataaaaatgataa ctacatagttccaaaggctcagcgaaatgatcgcgaggagattaggaagaagctcgccatggcgtcggacgtggaagaag actgctttagtgacgacaaatcctacaggaaaacctcatcccgagcgctgacaggcaaaaatctccagatctgcttcatg aatgaggaccaggaccagacgacggaagtgccagagtcgtctgctagcaccagcatttccgcggaagtgaagaccaaaac ggaaccggttaagacgggtaaaccaaatacaaaatcaaaaccggagtcgtccgttaacgagaaaaaaccacacgaagaag gtgatgaagatttctttaagaaacaagccagacttcagcgagaagctagagccgctctggcacaggccagtaccatggca catatgcagttagaagttgaaagacaacagaagaaaaaatccccaattgcagaaattgttggaatcccatatattggtga caacaggcgacaacgggttggtctgaagttgatgtatgaaatgaatgtagcccagcttcaagttgtagtcaatgacctac atacacaaatagaaaatttaaatgaggagctggtgaaactgctgatggagagagatgagctccatatgagccaagattct atgttggttgatatagaggacctatcaaggagagctgaagaaactgctgtacgcgtaaacgccaagcaagtacgggagca ctccaaatcatga |
|
Protein
| Protein ID | pfu_aug2.0_23.1_10102.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10102.t1 MEGSEFADLMVEGDTSLDSPDLTQERLDRLERNRLVMKALDAGITNRLYPQKTEVKNEEDRAAIMIQKNFRGYMDRKKYI ELLFQQFTEEEEKQKNKTEKQMEEGELLVENHQLEVLLDDNTTTRRNKARHYLSDVITIQRAWRTYVRRKSEHTSTGEID DTEKDRDTEKGIKASSSKSLQTSNKNSCDIEKASFVNDRTISTSDFKLEDNDKNAIRSAADSSTEFEVADDNVRIVIEGC EKDKDRLVKETQSVDSLSGLSDSTPEENTQHRTHDSTPEDDRVYLGYENSKQHVLNKLKQDSDADCVSIASDYSEVSVPL RELAESEVEIVQKADLADKSFVPSSTANSAIQRNPEETDEEFSKRVRKINLLSIAQEFADLKKVNAKALPFGLHKSYIEG ESSSSGESSRQSSEMNTPSDPSITFNDNDITRGCKNQRGDLNSNISENNSLKSKKNSNSKKNDNDKSTVDGSENDGDFDV YNIETAVPNMDWEALERQLQLATQEEQTRQKSLRKKNSEYEEEARPEVQPQETMIDNVEPINLDFSERDLIPYPDYSEKS FPFYKTKCKSESEIDDKLKITSKLLENDDDMISSHCSEKFIDSLEDDEFFDDFDEFDGGLSTRLNFSSNPEFSRLYFDSG SVENSPKLKKKIQFETIVKPLEDKNDNYIVPKAQRNDREEIRKKLAMASDVEEDCFSDDKSYRKTSSRALTGKNLQICFM NEDQDQTTEVPESSASTSISAEVKTKTEPVKTGKPNTKSKPESSVNEKKPHEEGDEDFFKKQARLQREARAALAQASTMA HMQLEVERQQKKKSPIAEIVGIPYIGDNRRQRVGLKLMYEMNVAQLQVVVNDLHTQIENLNEELVKLLMERDELHMSQDS MLVDIEDLSRRAEETAVRVNAKQVREHSKS |
|