Gene
| Gene Model ID | pfu_aug2.0_23.1_10098 |
|---|---|
| Locus | scaffold23.1 : 162278 ... 177595 : - |
| To GenomeBrowser | scaffold23.1:162278..177595 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_8290.1_09727 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alkaline ceramidase 3 isoform x2 | GO:0008284 GO:0030173 GO:0030176 GO:0046512 GO:0070774 GO:0071602 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10098.t1 | 2 | 1 | Ceramidase | 5 | 31 | 0.0 | 170.3 | 1.1e-12 | 5.5e-09 | 35.5 |
| pfu_aug2.0_23.1_10098.t1 | 2 | 2 | Ceramidase | 32 | 200 | 0.0 | 170.3 | 5.60519e-44 | 2.69999e-40 | 138.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10098.t1 | gi|504156143|ref|XP_004589922.1| | PREDICTED: alkaline ceramidase 3 isoform X2 [Ochotona princeps] | 0.0 |
| pfu_aug2.0_23.1_10098.t1 | gi|507949661|ref|XP_004683285.1| | 0.0 | |
| pfu_aug2.0_23.1_10098.t1 | gi|634848384|ref|XP_007939104.1| | PREDICTED: alkaline ceramidase 3 isoform X2 [Orycteropus afer afer] | 0.0 |
| pfu_aug2.0_23.1_10098.t1 | gi|260800620|ref|XP_002595196.1| | hypothetical protein BRAFLDRAFT_238691 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_23.1_10098.t1 | gi|625219380|ref|XP_007649770.1| | PREDICTED: alkaline ceramidase 3 isoform X3 [Cricetulus griseus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10098.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10098.t1 atggccccagtggacggactttggggcagtccaactgctacgattgattggtgcgaagaaaactacaaagttacaccttt tattgctgaattttctgttggttttggttcctggtgcttccatatgacattactgtacagtatgcaattgttagatgaac ttcccatgatatatggctcggcctttctgttgtactcacatatggaagtgaccagtcccgtgggtaataaaaaccgtcct ctccaaatagccctggttttatattgtgcaatagttactgctgtttacttgtttagcaaatttgtaatattttttcaggt ggcatatggcattatggtaaccctaatggtgctagcttcatttcgtgtacttttatatcatgaacataatacaccattgt ttattgcggcattctgtacatacatgggaggattcatcttgtggttaatagacaatcatttctgtggacttttaagagag tacagatcatcagtcccagttattttcaaacctctattagagttacatgcatggtggcacgtgttagccggcacagggac ctacctctccgttatgtttagtgcacatactagatacctccatctgaacataaagcctgtgataaggtga |
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Protein
| Protein ID | pfu_aug2.0_23.1_10098.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10098.t1 MAPVDGLWGSPTATIDWCEENYKVTPFIAEFSVGFGSWCFHMTLLYSMQLLDELPMIYGSAFLLYSHMEVTSPVGNKNRP LQIALVLYCAIVTAVYLFSKFVIFFQVAYGIMVTLMVLASFRVLLYHEHNTPLFIAAFCTYMGGFILWLIDNHFCGLLRE YRSSVPVIFKPLLELHAWWHVLAGTGTYLSVMFSAHTRYLHLNIKPVIR |
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