Gene
| Gene Model ID | pfu_aug2.0_23.1_10097 |
|---|---|
| Locus | scaffold23.1 : 145926 ... 157467 : + |
| To GenomeBrowser | scaffold23.1:145926..157467 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_8290.1_09726 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable 4-hydroxy-2-oxoglutarate mitochondrial-like isoform 2 | GO:0005739 GO:0008152 GO:0008700 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10097.t1 | 1 | 1 | DHDPS | 50 | 297 | 0.0 | 182.8 | 0.0 | 0.0 | 182.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10097.t1 | gi|676494018|ref|XP_009066425.1| | hypothetical protein LOTGIDRAFT_211287 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_23.1_10097.t1 | gi|390356983|ref|XP_785116.3| | 0.0 | |
| pfu_aug2.0_23.1_10097.t1 | gi|390356981|ref|XP_003728901.1| | PREDICTED: 4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_23.1_10097.t1 | gi|148227582|ref|NP_001088351.1| | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial precursor [Xenopus laevis] | 0.0 |
| pfu_aug2.0_23.1_10097.t1 | gi|452085182|ref|NP_001263607.1| | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10097.t1 atggtgcgagtgttgctgaagtgcatagctgcctgtggccgtgtgtgtggggtagttaaaggaccgcacccctcccactg gacggggaatttggctatggcctctctgtctacgaggaatcaggtgcctgtgatagacacctgttatgtagtacagggta gtaacggagagtatgcataccagacagtggaggagagagttgagatggtacgtcatgtggtacagctctgtggggacgac aaactcatcatagcaggctcaggatgtgaatccacaagggaaactattgagatgacccagaagatggctgatgtaggagc gaaagccgtattggttgtcaccccttgttattataaagggggcatgtcaaatgatgcgctggtacaccatttctcagtgg ttgcagaccatagccccatccctgttatattatatagtgtacctagtaatacaaccatagacctggcaccagaagtcatc attagattgtctgagcatcccaacatcataggcctcaaagatagcggtggagacatatcaaaactgggaaatttagtgta tatgaccaagaagaatgatttccagattttagcaggatctgctggtttcctgttacctgcttatgttgtaggttgtgttg gaggcgtctgtgctctaggtaatttccttggcaaggagatgtgcgagctagaacgtctgtataaagagggaagaatggct gaagccaaagatctacagcatcgtatggtggcacctaatgcttgtgtgaccaggagatttggagtaccaggactgaaggt tgccatggactggtttggttactatggaggcccgaccaggtcacctctaatgcctatgtctgagacagataccaaagcaa tgagagacatttttgttaggaatggttttctgtcaaactga |
|
Protein
| Protein ID | pfu_aug2.0_23.1_10097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10097.t1 MVRVLLKCIAACGRVCGVVKGPHPSHWTGNLAMASLSTRNQVPVIDTCYVVQGSNGEYAYQTVEERVEMVRHVVQLCGDD KLIIAGSGCESTRETIEMTQKMADVGAKAVLVVTPCYYKGGMSNDALVHHFSVVADHSPIPVILYSVPSNTTIDLAPEVI IRLSEHPNIIGLKDSGGDISKLGNLVYMTKKNDFQILAGSAGFLLPAYVVGCVGGVCALGNFLGKEMCELERLYKEGRMA EAKDLQHRMVAPNACVTRRFGVPGLKVAMDWFGYYGGPTRSPLMPMSETDTKAMRDIFVRNGFLSN |
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