Gene
| Gene Model ID | pfu_aug2.0_23.1_10094 |
|---|---|
| Locus | scaffold23.1 : 108064 ... 123135 : - |
| To GenomeBrowser | scaffold23.1:108064..123135 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | pfu_aug1.0_33411.1_40916 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 2a | GO:0010467 GO:0034645 GO:0044267 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10094.t1 | 4 | 1 | eIF2A | 37 | 90 | 0.0 | 195.4 | 0.00016 | 1.2 | 8.7 |
| pfu_aug2.0_23.1_10094.t1 | 4 | 2 | eIF2A | 42 | 90 | 0.0 | 195.4 | 0.00032 | 2.4 | 7.8 |
| pfu_aug2.0_23.1_10094.t1 | 4 | 3 | eIF2A | 214 | 265 | 0.0 | 195.4 | 2.7e-15 | 2.0e-11 | 43.9 |
| pfu_aug2.0_23.1_10094.t1 | 4 | 4 | eIF2A | 267 | 376 | 0.0 | 195.4 | 2.24208e-44 | 1.6e-40 | 138.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10094.t1 | gi|524879481|ref|XP_005096415.1| | PREDICTED: eukaryotic translation initiation factor 2A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_23.1_10094.t1 | gi|676476289|ref|XP_009060744.1| | hypothetical protein LOTGIDRAFT_234486, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_23.1_10094.t1 | gi|731499701|ref|XP_010594259.1| | PREDICTED: eukaryotic translation initiation factor 2A [Loxodonta africana] | 0.0 |
| pfu_aug2.0_23.1_10094.t1 | gi|696999657|ref|XP_009565987.1| | PREDICTED: eukaryotic translation initiation factor 2A [Cuculus canorus] | 0.0 |
| pfu_aug2.0_23.1_10094.t1 | gi|478489869|ref|XP_004419309.1| | PREDICTED: eukaryotic translation initiation factor 2A isoform 1 [Ceratotherium simum simum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10094.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10094.t1 atggctgcctccatagcattaagaggtgctgatggtatatggatggttaatggtccccccaacctggacccaaaagcaga gttctcaaaggagggaagtccagcatgtaaagtaatgactttcagtcaagatggtcaaagaatggcctggtgtaatggaa catgcacagtgattgtaaacacagaggctgattacaaaactataacggagatagacaaaggaaaaatcaattgtatgaca ttctctcctaaaggaaccatactagcattgtgggaaaactatacagttaatcagacaacaaaccaaggaaatcctaattt gcatttatatgacgctacatcaggggacttgctcaaaagccttatacagaaaaaacaatctaactgggatccaaagtgga cagatgatgaaggaattgcatgtagaaatgtcaacaatgaacttcactttttcgaaggaaataattttgagacaattaag accaagttacatctgcagaaagtgtcgttgtttagtttagcttccagtggacccccttacactgttgcaggatatgttcc agggtcaaagggtcagccatcttttgtgcggatatttcgctatcctaatttcggtggtccacaggcagcattagcaaaca aaagcttcttcaaagcagatgacgtacagatgaaatggaataaagcgggaacggctttactcgttctgacctcgacggag gccagcgaccagtcatattacggagatcaaggcctacacttcctgtccactaacggagaaagtaacttggtgtccttagt catgcctgccaaagtcacgttattcaacatgaagacagagcccatatttgacttcggtacaggaccaaggaatgtagcct acttcagtccccatgggaatcttctctgccttgctggatttggaaatttacgaggaaacttggaattctgggatccaaaa agcaggaagttgatagctcagactcagtctcccgactcgacaagctttgagtggtgccctgacggacagcatgtgcttac agctactactgccccgagattacgtgtcgctaatgggtatagagtgtggcattattcaggaaattgtctcaagcaggtgt tgatagataagggcagagaattatgggaagcaagatggcagcccggaagttattccgaaccagtgataagaacacataac ctgccagcagcaggaaatacatcatcagcccctgctccagaaggtaaaggagcataccgtcctccccaagctcgtggtac gtctgcctccatcaaactacatgagtatgaagctccgtctgatccaaacaagaaagctgaagatccaaacaagcctgtca gtaaaaacaagaaaaagagagacgcaaagaaggccaaagctgctcaagaaggcgctcaatcccatgatgctccagtctca gccccatcagctactcccgtcccagcatcctctgctccagcaatgggttccactggcaatgtagagactgataaacgcat ccgcaatttacgaaagaaattacaacaaatagagaaattgaaggaacagaaagcttcaggaaaacaactagaattgaatc agatggagaaattaaagacggaagagtcgttgctaaaggaacttgctgaactggagatatcttga |
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Protein
| Protein ID | pfu_aug2.0_23.1_10094.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10094.t1 MAASIALRGADGIWMVNGPPNLDPKAEFSKEGSPACKVMTFSQDGQRMAWCNGTCTVIVNTEADYKTITEIDKGKINCMT FSPKGTILALWENYTVNQTTNQGNPNLHLYDATSGDLLKSLIQKKQSNWDPKWTDDEGIACRNVNNELHFFEGNNFETIK TKLHLQKVSLFSLASSGPPYTVAGYVPGSKGQPSFVRIFRYPNFGGPQAALANKSFFKADDVQMKWNKAGTALLVLTSTE ASDQSYYGDQGLHFLSTNGESNLVSLVMPAKVTLFNMKTEPIFDFGTGPRNVAYFSPHGNLLCLAGFGNLRGNLEFWDPK SRKLIAQTQSPDSTSFEWCPDGQHVLTATTAPRLRVANGYRVWHYSGNCLKQVLIDKGRELWEARWQPGSYSEPVIRTHN LPAAGNTSSAPAPEGKGAYRPPQARGTSASIKLHEYEAPSDPNKKAEDPNKPVSKNKKKRDAKKAKAAQEGAQSHDAPVS APSATPVPASSAPAMGSTGNVETDKRIRNLRKKLQQIEKLKEQKASGKQLELNQMEKLKTEESLLKELAELEIS |
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