Gene
| Gene Model ID | pfu_aug2.0_23.1_10093 |
|---|---|
| Locus | scaffold23.1 : 79426 ... 87337 : + |
| To GenomeBrowser | scaffold23.1:79426..87337 |
| Genes list of scaffold | scaffold23.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| contactin-associated 2 | GO:0016020 GO:0030900 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_23.1_10093.t1 | 1 | 1 | F5_F8_type_C | 53 | 123 | 1.4e-11 | 44.3 | 1.2e-15 | 1.8e-11 | 43.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_23.1_10093.t1 | gi|114145415|ref|NP_001041331.1| | contactin-associated protein like 5-4 precursor [Rattus norvegicus] | 2.0e-07 |
| pfu_aug2.0_23.1_10093.t1 | gi|551503710|ref|XP_005803394.1| | PREDICTED: contactin-associated protein-like 2-like [Xiphophorus maculatus] | 5.0e-07 |
| pfu_aug2.0_23.1_10093.t1 | gi|558147154|ref|XP_006119831.1| | PREDICTED: contactin-associated protein-like 2 [Pelodiscus sinensis] | 5.0e-07 |
| pfu_aug2.0_23.1_10093.t1 | gi|597780057|ref|XP_007253625.1| | PREDICTED: contactin-associated protein-like 2-like, partial [Astyanax mexicanus] | 5.0e-07 |
| pfu_aug2.0_23.1_10093.t1 | gi|617385832|ref|XP_007547946.1| | PREDICTED: contactin-associated protein-like 2 [Poecilia formosa] | 5.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_23.1_10093.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10093.t1 atgtgcgtcacatccgccagacagaataaggcatgtgtgtcactggaaagaacttgtagtgagaaacgttacttagtaac aggaaaacatggagttacgtcagacagagtgacgtattcttccttttatcctggcgttatatactatgaactcggcagca caagtggctgggcacctgcgatatcggacttgtatcagtggattcaggttctatttctgagtaagaggattgtactcggt atcatcacagaacctcgttatggatatacacaatgggtcactagttacagcgtggaatttctggatgattccaatgagtg gacatacataacggatcaaagtgggaataaaatggatgctagcgcaaccatgtatgaaaacaagacaagaaagccacgta gtcttgtttttaatgaaggacttgtagtcgttacacgtgaattcgaatctggcgatggaaatgaatatgtttttctcgga atattacagctgaactcaagaagataa |
|
Protein
| Protein ID | pfu_aug2.0_23.1_10093.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_23.1_10093.t1 MCVTSARQNKACVSLERTCSEKRYLVTGKHGVTSDRVTYSSFYPGVIYYELGSTSGWAPAISDLYQWIQVLFLSKRIVLG IITEPRYGYTQWVTSYSVEFLDDSNEWTYITDQSGNKMDASATMYENKTRKPRSLVFNEGLVVVTREFESGDGNEYVFLG ILQLNSRR |
|