Gene
| Gene Model ID | pfu_aug2.0_2287.1_25368 |
|---|---|
| Locus | scaffold2287.1 : 17530 ... 25825 : - |
| To GenomeBrowser | scaffold2287.1:17530..25825 |
| Genes list of scaffold | scaffold2287.1 |
| Synonym | pfu_aug1.0_26870.1_11806 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2287.1_25368.t1 | 4 | 1 | GOLD_2 | 32 | 54 | 1.1e-13 | 51.6 | 4.8 | 10000.0 | -3.4 |
| pfu_aug2.0_2287.1_25368.t1 | 1 | 1 | CRAL_TRIO_N | 43 | 83 | 9.8e-07 | 28.8 | 1.7e-09 | 3.6e-06 | 27.0 |
| pfu_aug2.0_2287.1_25368.t1 | 2 | 1 | CRAL_TRIO | 107 | 168 | 1.6e-38 | 131.7 | 0.0016 | 3.4 | 7.1 |
| pfu_aug2.0_2287.1_25368.t1 | 4 | 2 | GOLD_2 | 154 | 178 | 1.1e-13 | 51.6 | 4.9 | 10000.0 | -3.4 |
| pfu_aug2.0_2287.1_25368.t1 | 2 | 2 | CRAL_TRIO | 191 | 355 | 1.6e-38 | 131.7 | 4.7e-39 | 1.0e-35 | 122.6 |
| pfu_aug2.0_2287.1_25368.t1 | 4 | 3 | GOLD_2 | 395 | 432 | 1.1e-13 | 51.6 | 1.1e-10 | 2.4e-07 | 31.0 |
| pfu_aug2.0_2287.1_25368.t1 | 4 | 4 | GOLD_2 | 440 | 484 | 1.1e-13 | 51.6 | 2.6e-09 | 5.5e-06 | 26.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2287.1_25368.t1 | gi|676444877|ref|XP_009050572.1| | hypothetical protein LOTGIDRAFT_187193 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2287.1_25368.t1 | gi|524888147|ref|XP_005100649.1| | PREDICTED: uncharacterized protein LOC101864628 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2287.1_25368.t1 | gi|658876941|ref|XP_008421484.1| | PREDICTED: SEC14-like protein 2 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_2287.1_25368.t1 | gi|573905546|ref|XP_006640494.1| | PREDICTED: SEC14-like protein 2-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_2287.1_25368.t1 | gi|734641524|ref|XP_010749651.1| | PREDICTED: SEC14-like protein 2 isoform X1 [Larimichthys crocea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2287.1_25368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2287.1_25368.t1 atgtcttctgacggacagtactgcttgtcggaggtggaaaatggtaaaaatgaccaaattgtggcgtcacgtgacagtac tctgaccaatgggaaggaaagtaaagcttctgccaaggaaagggccgctctggaaaagttcaagtcccgtgtgaacgatt tgatcaaaccagatcacgacgatttctatctggaaaaatggcttaaagctcgatgctacgatgttgacaaagccgtacag atgtttaggacgagtatggcctatagagagaaaatgaaagtagacacaatcttacacgactatgacccaccggaagtctt aaagaaataccttacgggtgggttctgtggccatgccaaggatgggtcaccggtcagggttgagctgtacggaaaactgg acattaaaggcctaatggcatcgtccaaaaaatctgacctggagaaggccaaactgaaacaatgtgagtggacggtacag gactggaaaaacgagagtcagaagagtatggcctatagagagaaaatgaaagtagacacaatcttacacgactatgaccc accggaagtcttaaagaaataccttacgggtgggttctgtggccatgccaaggatgggtcaccggtcagggttgagctgt acggaaaactggacattaaaggcctaatggcatcgtccaaaaaatctgacctggagaaggccaaactgaaacaatgtgag tggacggtacaggactggaaaaacgagagtcagaagagaggctatcgcgttgacggtctgaccgtaatatttgatatgga gggcgttagtacccggatgctgtggcgaccaggcatacagatgtatctacatatggtgaaggtactggaggataattatc cggagatgatgaggcggttactggttatcaatgcaccaagaatcttccctgttttatacaaactcgtccgaccactgatc agcgaggatatgaagaataagatccacattttagcaggaaattatagtgattatttgaagaaatacgttgatcccgataa tctgccgatgtgttatggcgggaaacttacagaccctgacggaaacccccgatgtgtcactatgatttgccagggtgggg acgtaccggaggagtactttctacaaagctcggacttgttagcagggatgactaagatatctgtcccaaggggagaaaaa gtccttatagacttcaacgttgaaaaagaaggaagcatactcaattgggaattcaaaacagaggactatgatatcgggtt tggggtactgtacaaatcagataaaggaaatgttcccgtcgttcccgtgtcacgtgtcaacagccacctggtggcagaag atggcagctggacctgccagaaaacgggaaaatatatgctctgctttgataacggatttagttggacgaagagtaaaatt gtgtattacagctgtgaagtattgtacacggacgacaaggaaattcggactgaaatcagcaaattagtggaagagggaga ctggcagacattatcagaaaaattcgaaaccacgcatctatga |
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Protein
| Protein ID | pfu_aug2.0_2287.1_25368.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2287.1_25368.t1 MSSDGQYCLSEVENGKNDQIVASRDSTLTNGKESKASAKERAALEKFKSRVNDLIKPDHDDFYLEKWLKARCYDVDKAVQ MFRTSMAYREKMKVDTILHDYDPPEVLKKYLTGGFCGHAKDGSPVRVELYGKLDIKGLMASSKKSDLEKAKLKQCEWTVQ DWKNESQKSMAYREKMKVDTILHDYDPPEVLKKYLTGGFCGHAKDGSPVRVELYGKLDIKGLMASSKKSDLEKAKLKQCE WTVQDWKNESQKRGYRVDGLTVIFDMEGVSTRMLWRPGIQMYLHMVKVLEDNYPEMMRRLLVINAPRIFPVLYKLVRPLI SEDMKNKIHILAGNYSDYLKKYVDPDNLPMCYGGKLTDPDGNPRCVTMICQGGDVPEEYFLQSSDLLAGMTKISVPRGEK VLIDFNVEKEGSILNWEFKTEDYDIGFGVLYKSDKGNVPVVPVSRVNSHLVAEDGSWTCQKTGKYMLCFDNGFSWTKSKI VYYSCEVLYTDDKEIRTEISKLVEEGDWQTLSEKFETTHL |
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