Gene
| Gene Model ID | pfu_aug2.0_226.1_20452 |
|---|---|
| Locus | scaffold226.1 : 199483 ... 210730 : + |
| To GenomeBrowser | scaffold226.1:199483..210730 |
| Genes list of scaffold | scaffold226.1 |
| Synonym | pfu_aug1.0_121.1_22010 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc102801619 | GO:0005488 GO:0005886 GO:0006812 GO:0007154 GO:0015276 GO:0044425 GO:0044700 GO:0044707 GO:0048518 GO:0050794 GO:0050896 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_226.1_20452.t1 | 3 | 1 | Neur_chan_LBD | 31 | 230 | 0.0 | 266.5 | 2.52234e-44 | 1.2e-40 | 138.9 |
| pfu_aug2.0_226.1_20452.t1 | 3 | 1 | Neur_chan_memb | 240 | 330 | 4.2e-24 | 85.7 | 1.5e-15 | 7.4e-12 | 45.6 |
| pfu_aug2.0_226.1_20452.t1 | 3 | 2 | Neur_chan_LBD | 343 | 377 | 0.0 | 266.5 | 1.0 | 5200.0 | -3.7 |
| pfu_aug2.0_226.1_20452.t1 | 3 | 3 | Neur_chan_LBD | 424 | 623 | 0.0 | 266.5 | 1.4013e-43 | 7.0e-40 | 136.4 |
| pfu_aug2.0_226.1_20452.t1 | 3 | 2 | Neur_chan_memb | 634 | 721 | 4.2e-24 | 85.7 | 6.2e-15 | 3.1e-11 | 43.6 |
| pfu_aug2.0_226.1_20452.t1 | 3 | 3 | Neur_chan_memb | 740 | 769 | 4.2e-24 | 85.7 | 0.28 | 1400.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_226.1_20452.t1 | gi|585702666|ref|XP_006823104.1| | PREDICTED: uncharacterized protein LOC102801619 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_226.1_20452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_226.1_20452.t1 atgatcaagtctataataattctttcctcagtagtccatatcgtggcagcatcatatcatcaggcacaatttcccgatgt atgcaaaggtgaaagtgatttgtattcacatattgtaaaaacatacaataagaatatccgaccatgcttcagcgagagga gcttgacggtaactatttctttcagcttgcttaacatcaatgagctcgatgaggtgaccggtaaattttctgtcattgga tttttatatatttcatgggaggataatcgaatctcgtggaatccaagagaattcaacggaactagagtattatttctacc acaagatatggtttggaaaccagatctctttctcagaaatcccttcacaaaaattaggaaactcggaatagacgaaatgg tggtacattatctgaaatcaggacacgctgtctggcagcctggggacatgtttgagagcgtatgtagagtgaacgtagaa aagtatccttttgatgtacaaacttgtagtctgactttcctgccatggggactgaataagaatcgtctgcaattcagact tataaaagatgtagtggaccttgattatttcacttcgcagggggcatggaatgtaacagagacaaaggcatttacgtttg aaaggaacaccgtacaatatgtccagtttgatataacaatggaacgcagatcgactttcgtcatgatcaacatggtgtat ccagtcttcctccttggtgttctcaatttgtttgtgttcttcgtgcctgccaattccggagaacgaataggattttcctt gtcaattctcctatccactgttgtttttctgaccctcatatcggacaatctaccaagatcgtctgacccaaagactccgt ttttgtgctatactctttttatagaaatagtactgaattcgtgcatcatcctctgtggcattgtcggagtcagaatccat caaaagaagacagaagtcccaagaatgttccaaaccggtctgtcctgtacatgtaagaagaagaatgataaggaatatgc cgtagatgaagagaatcgagtcacgtgggaagacaggaagtattatttgtctaacaaaaatattataaagatgctcagaa tgtccaaggagtcattaagttacaacgacgcaatgttgttaagaagggatattgagctcatgataaaatctgtaataatt ctttcctcagtaattcatatagtggcagcatcatttcatcaagcgcattttcctaatgtatgcaaaggtgaaagtgattt gtattcacatattgtaaaaacatacaacaaagatatccgaccatgcttcagcgagaggagcttgacggtagctatttctt tcagtttgcttaacatcaatgatctcgatgaggtgactggtaaattttctgtcattggatttttatacatttcatgggag gataatcgaatctcgtggaatccaagagaattcaacggaactagagtattatttctaccacaagatatggtttggaaacc agatctctttctcagaaatccctttacgaaaattaggaaactcggaatagacgaaatggtggtacattatctgaaatcag gacacgctgtctggcagcctggggacatgtttgagagtgtatgtagagtgaacgtagaaaagtatccttttgatgtacaa acttgtagtctgactttcctggcatggggactgaataagaatcgtctgcaattcagactaatcaaagatgtagtggacct tgattatttcacttcgcagggggcatggaatgtgatagacacaaaagcgtttacgtttgaaaggaacatcgtacaatatg tccagtttgatataacaatggaacgcagatcgactttcgtcatgatcaacatggtgtatccagtcttcctccttggtgac ctcaatctgtttgtgttcttcgtgcctgccaattccggagaacgaataggattttccttgtcaattctcctatccactgt tgtttttctgaccctcatatcggataacctaccaagatcgtctgacccaaagactccgtttttgtgctatactcttttta tagaaatagtattgaattcttgtatcatcctctgcggcattgtcggagtcaggatccatcacaagaagacagaaattcca agaatgttccaaacctgtctgtcttgtacatgtaagaagaagaatgataaggaatatgccgtagatgaagagaatcgagt cacgtgggaagacgtaggcactctttttgacaagttgtgtttcagcctttttgttattgcgctattcctcaattattact ttttctatcttcatacaaaatgttcaaatatggtcataaaagaaggtacatcatga |
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Protein
| Protein ID | pfu_aug2.0_226.1_20452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_226.1_20452.t1 MIKSIIILSSVVHIVAASYHQAQFPDVCKGESDLYSHIVKTYNKNIRPCFSERSLTVTISFSLLNINELDEVTGKFSVIG FLYISWEDNRISWNPREFNGTRVLFLPQDMVWKPDLFLRNPFTKIRKLGIDEMVVHYLKSGHAVWQPGDMFESVCRVNVE KYPFDVQTCSLTFLPWGLNKNRLQFRLIKDVVDLDYFTSQGAWNVTETKAFTFERNTVQYVQFDITMERRSTFVMINMVY PVFLLGVLNLFVFFVPANSGERIGFSLSILLSTVVFLTLISDNLPRSSDPKTPFLCYTLFIEIVLNSCIILCGIVGVRIH QKKTEVPRMFQTGLSCTCKKKNDKEYAVDEENRVTWEDRKYYLSNKNIIKMLRMSKESLSYNDAMLLRRDIELMIKSVII LSSVIHIVAASFHQAHFPNVCKGESDLYSHIVKTYNKDIRPCFSERSLTVAISFSLLNINDLDEVTGKFSVIGFLYISWE DNRISWNPREFNGTRVLFLPQDMVWKPDLFLRNPFTKIRKLGIDEMVVHYLKSGHAVWQPGDMFESVCRVNVEKYPFDVQ TCSLTFLAWGLNKNRLQFRLIKDVVDLDYFTSQGAWNVIDTKAFTFERNIVQYVQFDITMERRSTFVMINMVYPVFLLGD LNLFVFFVPANSGERIGFSLSILLSTVVFLTLISDNLPRSSDPKTPFLCYTLFIEIVLNSCIILCGIVGVRIHHKKTEIP RMFQTCLSCTCKKKNDKEYAVDEENRVTWEDVGTLFDKLCFSLFVIALFLNYYFFYLHTKCSNMVIKEGTS |
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