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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_226.1_20451
Locus scaffold226.1 : 180558 ... 195112 : -
To GenomeBrowser scaffold226.1:180558..195112
Genes list of scaffold scaffold226.1
Synonym pfu_aug1.0_34816.1_04906

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_226.1_20451.t1 4 1 TPR_11 138 200 3.1e-23 81.1 2.5e-15 2.3e-12 46.3
pfu_aug2.0_226.1_20451.t1 7 1 TPR_2 140 168 2.4e-13 48.8 4.0e-06 0.0037 17.0
pfu_aug2.0_226.1_20451.t1 4 1 TPR_16 140 200 5.3e-07 30.1 2.7e-06 0.0025 18.4
pfu_aug2.0_226.1_20451.t1 4 1 TPR_12 142 196 2.5e-19 68.9 0.00037 0.34 10.8
pfu_aug2.0_226.1_20451.t1 4 1 TPR_14 142 174 7.0e-07 29.3 9.4e-05 0.087 13.5
pfu_aug2.0_226.1_20451.t1 6 1 TPR_1 145 168 4.2e-15 54.6 1.8e-05 0.017 14.7
pfu_aug2.0_226.1_20451.t1 5 1 TPR_8 145 168 4.4e-09 35.4 0.00071 0.65 9.9
pfu_aug2.0_226.1_20451.t1 5 1 TPR_7 145 165 5.0e-07 29.0 0.17 160.0 2.5
pfu_aug2.0_226.1_20451.t1 2 1 Apc3 152 198 3.8e-06 26.9 0.017 16.0 5.7
pfu_aug2.0_226.1_20451.t1 5 2 TPR_8 171 200 4.4e-09 35.4 0.31 280.0 1.6
pfu_aug2.0_226.1_20451.t1 7 2 TPR_2 172 200 2.4e-13 48.8 0.031 29.0 4.9
pfu_aug2.0_226.1_20451.t1 6 2 TPR_1 178 200 4.2e-15 54.6 0.049 45.0 3.8
pfu_aug2.0_226.1_20451.t1 4 2 TPR_12 276 300 2.5e-19 68.9 3.8 3500.0 -2.0
pfu_aug2.0_226.1_20451.t1 7 3 TPR_2 283 294 2.4e-13 48.8 7.0 6500.0 -2.5
pfu_aug2.0_226.1_20451.t1 4 3 TPR_12 318 384 2.5e-19 68.9 9.9e-13 9.2e-10 38.3
pfu_aug2.0_226.1_20451.t1 4 2 TPR_11 319 347 3.1e-23 81.1 0.0014 1.3 8.6
pfu_aug2.0_226.1_20451.t1 6 3 TPR_1 319 342 4.2e-15 54.6 0.009 8.4 6.1
pfu_aug2.0_226.1_20451.t1 7 4 TPR_2 319 344 2.4e-13 48.8 0.0037 3.5 7.7
pfu_aug2.0_226.1_20451.t1 5 2 TPR_7 322 352 5.0e-07 29.0 0.12 110.0 2.9
pfu_aug2.0_226.1_20451.t1 4 2 TPR_16 326 383 5.3e-07 30.1 0.085 79.0 4.1
pfu_aug2.0_226.1_20451.t1 4 3 TPR_11 360 423 3.1e-23 81.1 4.2e-08 3.9e-05 23.2
pfu_aug2.0_226.1_20451.t1 6 4 TPR_1 360 384 4.2e-15 54.6 1.4e-05 0.013 15.1
pfu_aug2.0_226.1_20451.t1 7 5 TPR_2 360 383 2.4e-13 48.8 0.00017 0.16 11.9
pfu_aug2.0_226.1_20451.t1 5 3 TPR_8 360 382 4.4e-09 35.4 0.0025 2.3 8.1
pfu_aug2.0_226.1_20451.t1 4 2 TPR_14 360 394 7.0e-07 29.3 0.014 13.0 6.7
pfu_aug2.0_226.1_20451.t1 5 3 TPR_7 361 384 5.0e-07 29.0 2.0e-05 0.019 14.7
pfu_aug2.0_226.1_20451.t1 4 3 TPR_16 365 425 5.3e-07 30.1 0.0013 1.2 9.8
pfu_aug2.0_226.1_20451.t1 2 2 Apc3 372 462 3.8e-06 26.9 6.6e-07 0.00062 19.8
pfu_aug2.0_226.1_20451.t1 4 4 TPR_12 394 467 2.5e-19 68.9 3.4e-08 3.2e-05 23.7
pfu_aug2.0_226.1_20451.t1 6 5 TPR_1 396 419 4.2e-15 54.6 0.00035 0.33 10.6
pfu_aug2.0_226.1_20451.t1 5 4 TPR_8 397 418 4.4e-09 35.4 0.15 140.0 2.6
pfu_aug2.0_226.1_20451.t1 7 6 TPR_2 398 423 2.4e-13 48.8 0.0072 6.7 6.8
pfu_aug2.0_226.1_20451.t1 4 3 TPR_14 401 427 7.0e-07 29.3 1.8 1700.0 0.1
pfu_aug2.0_226.1_20451.t1 5 4 TPR_7 409 426 5.0e-07 29.0 1.4 1300.0 -0.4
pfu_aug2.0_226.1_20451.t1 4 4 TPR_11 437 462 3.1e-23 81.1 0.057 53.0 3.5
pfu_aug2.0_226.1_20451.t1 5 5 TPR_8 437 462 4.4e-09 35.4 0.013 12.0 5.9
pfu_aug2.0_226.1_20451.t1 4 4 TPR_14 437 465 7.0e-07 29.3 0.13 120.0 3.7
pfu_aug2.0_226.1_20451.t1 6 6 TPR_1 438 462 4.2e-15 54.6 0.011 10.0 5.9
pfu_aug2.0_226.1_20451.t1 7 7 TPR_2 438 463 2.4e-13 48.8 0.029 27.0 4.9
pfu_aug2.0_226.1_20451.t1 5 5 TPR_7 438 462 5.0e-07 29.0 0.052 48.0 4.0
pfu_aug2.0_226.1_20451.t1 4 4 TPR_16 438 463 5.3e-07 30.1 0.14 130.0 3.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_226.1_20451.t1 gi|594658838|ref|XP_007177723.1| PREDICTED: tetratricopeptide repeat protein 25-like isoform X2 [Balaenoptera acutorostrata scammoni] 0.0
pfu_aug2.0_226.1_20451.t1 gi|196013019|ref|XP_002116371.1| hypothetical protein TRIADDRAFT_30804 [Trichoplax adhaerens] 9.94922e-44
pfu_aug2.0_226.1_20451.t1 gi|156389340|ref|XP_001634949.1| predicted protein [Nematostella vectensis] 5.99756e-43

Transcript
Transcript IDpfu_aug2.0_226.1_20451.t1
Definition-
>pfu_aug2.0_226.1_20451.t1
atgactgtttcgttattaggaccgcgttcatccacaccaaaactgtctgctccgccacggacgttaccgaaagtcccgaa
agctgcgattgaacagaaaaaggcggggaaaggcttacgagcacttcctcctgtccctcctggaccgagagctgaaggca
tcaaaccttcccgatcattaccgaaagttcccggacctttgcaagcagcaagttcgccaattttaagcgactcacattac
tctgttcagaatccagcgatccctacggtaccgaaaggacagagggttttaccgaaaattcccaaactgaacattgcact
gacgaaatactacgaaaatggtaaacagacaaagaccaatgttactcagccgccggtgcagcaagaccggaaggggaaga
tgcatggtaattacaaaatggaggcagatgattacttacgtaaaggagaactcggaaaagcactggagacgtacaatgcg
gcactgaagctgattccagacaataagtccaccttggtagccagatcccgatgttttcagttgctagggaaacaaagaaa
agctatgcaagatgtggattcagctctcaacttggacccgcttttctatgagatactaacagatatttccgttgcagata
cgataaacgaagagcctttctccccgaggaggaattctcctaggaaggcggtgagaacgtcggaacagacaaaaaagtcc
cgaaaaacaagagaggcccagcaacgggaacacatggtccagcaaatcaacagagagatggacgaaatagaacttggtaa
gatttcattagttaaagaatttgttgctgtcatactttactcaatagcatacgttgatggccgttacaatgaatgtatca
accgtgctgagttatgtctgaacactgtgacgtcatatagtgacatcaccataccaaacgtgatgggtatcatagccaaa
ctacacagttatataggtaacgctgccatcgagaacagggactatgtggcagcactagatcatcaccacagggacctaca
gataggtgaagaaggagacgacgaagaggccatgtcaagagccctcggtaatcttggaagaatctatgtcttccagaaca
atcaccagaaagccctcgaattattctctcgtaaggtgcctctttgtaagacacgtctggagacagcgtggttgtaccat
gagattggtaactgcttcctagtgttagggcagtacaagtttgcaatggaagccgccctaaggtccctgggggcggctga
agaggccgtggaatggagctatcaactacaggctcttgttttacttggcgttgcagaagtgaaattgaagagttttacga
atgctatcaacactttcgaaagggcgagagatcaagcaagaatgcaaggtgacataaaggcagaagaagcaataacagag
gcaattcatgatgtaaatgacaaaataatggacgaactaaaatcagcacgtggtgaaatcagtagatcagaacgaggcta
taataagtcacgtggtgatttttcaggtaaattttctcacaatccccgatcccgagctgagtggtcggactattcaagca
tatttattccggaagatgacggtgacgtatcattgacagaaacaggatatgacacagattatctacatcttgatctcgat
caattaaggagcgactgggatacgtcgacttttggatctcaagcccaacttaatacaggacgcatttctataaaggatac
agacagacgcacggtgcgttcagcgaatcgtattcgatctggatttaggtcaacgatagcaatgtccagtgtggcgtcaa
tactgcgtcataacaccatcgcgaattga

Protein
Protein IDpfu_aug2.0_226.1_20451.t1
Definition-
>pfu_aug2.0_226.1_20451.t1
MTVSLLGPRSSTPKLSAPPRTLPKVPKAAIEQKKAGKGLRALPPVPPGPRAEGIKPSRSLPKVPGPLQAASSPILSDSHY
SVQNPAIPTVPKGQRVLPKIPKLNIALTKYYENGKQTKTNVTQPPVQQDRKGKMHGNYKMEADDYLRKGELGKALETYNA
ALKLIPDNKSTLVARSRCFQLLGKQRKAMQDVDSALNLDPLFYEILTDISVADTINEEPFSPRRNSPRKAVRTSEQTKKS
RKTREAQQREHMVQQINREMDEIELGKISLVKEFVAVILYSIAYVDGRYNECINRAELCLNTVTSYSDITIPNVMGIIAK
LHSYIGNAAIENRDYVAALDHHHRDLQIGEEGDDEEAMSRALGNLGRIYVFQNNHQKALELFSRKVPLCKTRLETAWLYH
EIGNCFLVLGQYKFAMEAALRSLGAAEEAVEWSYQLQALVLLGVAEVKLKSFTNAINTFERARDQARMQGDIKAEEAITE
AIHDVNDKIMDELKSARGEISRSERGYNKSRGDFSGKFSHNPRSRAEWSDYSSIFIPEDDGDVSLTETGYDTDYLHLDLD
QLRSDWDTSTFGSQAQLNTGRISIKDTDRRTVRSANRIRSGFRSTIAMSSVASILRHNTIAN

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