Gene
| Gene Model ID | pfu_aug2.0_226.1_20449 |
|---|---|
| Locus | scaffold226.1 : 10986 ... 20325 : - |
| To GenomeBrowser | scaffold226.1:10986..20325 |
| Genes list of scaffold | scaffold226.1 |
| Synonym | pfu_aug1.0_14404.1_39610 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_226.1_20449.t1 | 2 | 1 | DDE_Tnp_4 | 14 | 95 | 2.8026e-45 | 153.4 | 1.7e-17 | 3.2e-14 | 52.8 |
| pfu_aug2.0_226.1_20449.t1 | 4 | 1 | DDE_Tnp_1 | 17 | 31 | 2.3e-09 | 37.1 | 0.67 | 1200.0 | -1.3 |
| pfu_aug2.0_226.1_20449.t1 | 2 | 1 | Plant_tran | 18 | 100 | 5.0e-09 | 35.8 | 3.7e-06 | 0.0069 | 15.7 |
| pfu_aug2.0_226.1_20449.t1 | 4 | 2 | DDE_Tnp_1 | 36 | 92 | 2.3e-09 | 37.1 | 0.00021 | 0.39 | 10.2 |
| pfu_aug2.0_226.1_20449.t1 | 4 | 3 | DDE_Tnp_1 | 149 | 224 | 2.3e-09 | 37.1 | 3.0e-05 | 0.056 | 12.9 |
| pfu_aug2.0_226.1_20449.t1 | 2 | 2 | DDE_Tnp_4 | 161 | 288 | 2.8026e-45 | 153.4 | 1.5e-31 | 2.7e-28 | 98.5 |
| pfu_aug2.0_226.1_20449.t1 | 2 | 2 | Plant_tran | 209 | 293 | 5.0e-09 | 35.8 | 2.3e-06 | 0.0043 | 16.4 |
| pfu_aug2.0_226.1_20449.t1 | 4 | 4 | DDE_Tnp_1 | 230 | 285 | 2.3e-09 | 37.1 | 0.00028 | 0.52 | 9.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_226.1_20449.t1 | gi|548443466|ref|XP_005745806.1| | PREDICTED: putative nuclease HARBI1-like [Pundamilia nyererei] | 1.0e-33 |
| pfu_aug2.0_226.1_20449.t1 | gi|554885093|ref|XP_005952187.1| | PREDICTED: putative nuclease HARBI1-like [Haplochromis burtoni] | 3.0e-33 |
| pfu_aug2.0_226.1_20449.t1 | gi|554856507|ref|XP_005938423.1| | PREDICTED: putative nuclease HARBI1-like [Haplochromis burtoni] | 1.0e-32 |
| pfu_aug2.0_226.1_20449.t1 | gi|542262183|ref|XP_005465952.1| | PREDICTED: putative nuclease HARBI1-like [Oreochromis niloticus] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_226.1_20449.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_226.1_20449.t1 atgaaacacgcaaaaactagcatttgcaaaaggcaaatctgtcagcatgatggaattttactaggggactcggcatatgc ttgtacccgatatctgatgaccccatacaggactccagcagatgatgcccaggaaaggttcaatgacgcattgtgtaaaa cgagagtcactattgaacagacctatggaatcctcaagaaaagatttcagtcactacactatggactgagaactgacccg aaccaggcagccatttatatccatgcagcagctattctccacaacattgggattgagaaaggagacgtcatgatcgccag agacatcaacgccttctctgcctctgacatcacccaagatgtccagctacaggaccgacatcgaatatatgaggggatag acatggtaaaagggaggaagaggagggaggaagggaagggagagaaaggggaggaagggggagggagggaagggtggagg aagggggaggagggaggaaaggggatgatgatatgcgaccctaattttcgcataacttccgccagtataaattggcctgg ttctactcatgatagtagagtatggaagtcttcggcgctctacaggcagtttgaaaatggtcagcatgatggaattttac taggggactcggcatatgcttgtacccgatatctgatgaccccatacaggactccagcagatgatgcccaggaaaggttc aatgacgcattgtgtaaaacgagagtcactattgaacagacctatggaatcctcaagaaaagatttcagtcactacacta tggactgagaactgacccgaaccaggcagccatttatatccatgcagcagctattctccacaacattgggattgagaaag gagacgtcatgatcgccagagacatcaacgccttctctgcctctgacatcacccaagatgtccagctacaggaccgtaca gacggacgtttacgacggaatgacattaccagagggtttttcagctaa |
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Protein
| Protein ID | pfu_aug2.0_226.1_20449.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_226.1_20449.t1 MKHAKTSICKRQICQHDGILLGDSAYACTRYLMTPYRTPADDAQERFNDALCKTRVTIEQTYGILKKRFQSLHYGLRTDP NQAAIYIHAAAILHNIGIEKGDVMIARDINAFSASDITQDVQLQDRHRIYEGIDMVKGRKRREEGKGEKGEEGGGREGWR KGEEGGKGMMICDPNFRITSASINWPGSTHDSRVWKSSALYRQFENGQHDGILLGDSAYACTRYLMTPYRTPADDAQERF NDALCKTRVTIEQTYGILKKRFQSLHYGLRTDPNQAAIYIHAAAILHNIGIEKGDVMIARDINAFSASDITQDVQLQDRT DGRLRRNDITRGFFS |
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