Gene
| Gene Model ID | pfu_aug2.0_2195.1_18725 |
|---|---|
| Locus | scaffold2195.1 : 27896 ... 42851 : + |
| To GenomeBrowser | scaffold2195.1:27896..42851 |
| Genes list of scaffold | scaffold2195.1 |
| Synonym | pfu_aug1.0_41160.1_55806 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 13 member 3 isoform x2 | GO:0044765 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2195.1_18725.t1 | 1 | 1 | Na_sulph_symp | 7 | 522 | 0.0 | 300.5 | 0.0 | 0.0 | 294.3 |
| pfu_aug2.0_2195.1_18725.t1 | 3 | 1 | CitMHS | 41 | 156 | 7.4e-15 | 54.3 | 1.4e-07 | 0.00071 | 18.2 |
| pfu_aug2.0_2195.1_18725.t1 | 3 | 2 | CitMHS | 226 | 326 | 7.4e-15 | 54.3 | 0.00016 | 0.8 | 8.2 |
| pfu_aug2.0_2195.1_18725.t1 | 3 | 3 | CitMHS | 372 | 513 | 7.4e-15 | 54.3 | 1.7e-12 | 8.4e-09 | 34.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2195.1_18725.t1 | gi|657578758|ref|XP_008293265.1| | PREDICTED: solute carrier family 13 member 2-like [Stegastes partitus] | 0.0 |
| pfu_aug2.0_2195.1_18725.t1 | gi|524899497|ref|XP_005106179.1| | PREDICTED: solute carrier family 13 member 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2195.1_18725.t1 | gi|704532649|ref|XP_010183339.1| | PREDICTED: solute carrier family 13 member 3 isoform X2 [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_2195.1_18725.t1 | gi|723553151|ref|XP_010299004.1| | PREDICTED: solute carrier family 13 member 3 isoform X1 [Balearica regulorum gibbericeps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2195.1_18725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2195.1_18725.t1 atgggcattcttaacgatctgtggaatattaggaagctaatcatcgtggttctgactccaatcatttttctcccactgct gctggctacctccggagacgaaccacgatgtgcttttgtggtgatagtaatggcaatatattggataacagagtcgcttc caatagcgatgacggcattgttacctatagtcctctttccaatggtcggtctactgcatgcaaaggaagtgtcttccgtg tacctcaatgacacatcgatgctcttccttggtggattgatagtcgctgcagcaatagaacattggaacattcataaaag aatggcgctaagaatccttctacttgtgggcagtgagcctagatggttgatgcttggtctgatgatccccacgtggtttt tgtccatgtggatcagtaacacagcaaccaccgccatgatgattcctatagcaaatgcggttcttctacaattgaaggaa gctcgatcaaagcacaatgatagttcagagcccgaaacattcgaaaatggcatccatgttgacgaagtaaaaatggaaga aaaacctccacaatatgtcaagatagatcaagatacattaaaagagaaagaaaagggccaagacgaaggaagcggtatca gcgaaaatgacttccagagacttgggaaggctttatcacttgccattgcttactcctctaactgtggcgggataggcagt atcacgggaacaaatcccaacgttatcatgaaaggacaatcagacatattatatgaagatagaaatgctacatcacctgt aacttttagctcatggatgcagttctgtgtgcccatatcagctatcgtaacactgatagtatggatatggtttcagatct actttctaagatgtcgatcattcttttccaaggatcctgctcaggcaagaaaagttaaagaggttctgcgccaagaatat aggaaactggggtcaatcaagactgttacagactctactccttccatactgatttcagccagtctattcctcttcccctc agctatcccaagggtattctgctgtagatcggaagaggaaaagaagtacgttccactgttaccatggaaagtagcagaga agaccgtcccatggggagttatattactgcttggagggggatatgctctagctaagggaagcgagaaatccggtttatct tcatggttaggagatgagctagctgttttcagtgactttgaaccctgggtaatgaacatggtcctatgttttattgtggc ggcggccacagaggtcaccagtaacactgcaatatgtacccttataatgcccataatggcacaattggcattcaagctca aggtgaatcctctttactatatgttccctaccgcaattgcaacgtcctttgcatttatgttgcctgtagcaacgcctcct aatgcagttgtgttctcatacggttatgtcaaggtcatagacatggtgatagctggttttatcttaaacatcctaggagt ttttgttttggttcttgccacggaaacatggggtactgcaatcttcaactttcatactttaccttacgtattcaccaacc attcaatttctacaaattcatcgcttgccaacatgacgtcaacgactttacaaccttcttgtgattgctcaaatattacg tatacgtcaacgttatcaacgacaacataa |
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Protein
| Protein ID | pfu_aug2.0_2195.1_18725.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2195.1_18725.t1 MGILNDLWNIRKLIIVVLTPIIFLPLLLATSGDEPRCAFVVIVMAIYWITESLPIAMTALLPIVLFPMVGLLHAKEVSSV YLNDTSMLFLGGLIVAAAIEHWNIHKRMALRILLLVGSEPRWLMLGLMIPTWFLSMWISNTATTAMMIPIANAVLLQLKE ARSKHNDSSEPETFENGIHVDEVKMEEKPPQYVKIDQDTLKEKEKGQDEGSGISENDFQRLGKALSLAIAYSSNCGGIGS ITGTNPNVIMKGQSDILYEDRNATSPVTFSSWMQFCVPISAIVTLIVWIWFQIYFLRCRSFFSKDPAQARKVKEVLRQEY RKLGSIKTVTDSTPSILISASLFLFPSAIPRVFCCRSEEEKKYVPLLPWKVAEKTVPWGVILLLGGGYALAKGSEKSGLS SWLGDELAVFSDFEPWVMNMVLCFIVAAATEVTSNTAICTLIMPIMAQLAFKLKVNPLYYMFPTAIATSFAFMLPVATPP NAVVFSYGYVKVIDMVIAGFILNILGVFVLVLATETWGTAIFNFHTLPYVFTNHSISTNSSLANMTSTTLQPSCDCSNIT YTSTLSTTT |
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