Gene
| Gene Model ID | pfu_aug2.0_2149.1_32069 |
|---|---|
| Locus | scaffold2149.1 : 164909 ... 170495 : - |
| To GenomeBrowser | scaffold2149.1:164909..170495 |
| Genes list of scaffold | scaffold2149.1 |
| Synonym | pfu_aug1.0_43621.1_34282 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2149.1_32069.t1 | 4 | 1 | CBM_14 | 49 | 96 | 2.0e-23 | 82.0 | 6.4e-13 | 4.8e-09 | 36.0 |
| pfu_aug2.0_2149.1_32069.t1 | 4 | 2 | CBM_14 | 104 | 125 | 2.0e-23 | 82.0 | 9.3e-06 | 0.069 | 13.0 |
| pfu_aug2.0_2149.1_32069.t1 | 4 | 3 | CBM_14 | 142 | 159 | 2.0e-23 | 82.0 | 0.0044 | 33.0 | 4.5 |
| pfu_aug2.0_2149.1_32069.t1 | 4 | 4 | CBM_14 | 190 | 234 | 2.0e-23 | 82.0 | 1.9e-10 | 1.4e-06 | 28.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2149.1_32069.t1 | gi|195379120|ref|XP_002048329.1| | GJ13909 [Drosophila virilis] | 7.0e-08 |
| pfu_aug2.0_2149.1_32069.t1 | gi|675859334|ref|XP_009015227.1| | hypothetical protein HELRODRAFT_159937 [Helobdella robusta] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_2149.1_32069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2149.1_32069.t1 atgaaattggcaatcgttgtggtactttgtgttgctacagtacaggctttgagcagagttcgtcgacaaggtggacagct accaaactgtgttgataactgggccaatgttcccaatccttgtaagaataatccccagaacatagtgtatttcgcccatc cccgggacacgtcaaagttcatacaatgtgacgccatgggacaaatgtacataatacaatgtccagagaataccatcttc tcctctgctaccagatcttgtgtggcgccagtcacaaccgcagcgtgtggtccagatggcttagtcaatattctaccttg tccagacaggctggtatgggacgaaactaggtactcctgtgtgtacaagtccactctagccggtggtgcaaaacctacgt catcaactggtgatctgacgtcagcagacagactggtatgggacgaaactaggtactcctgtgtgtacaagtccactctt gccggcggtgcaagacctacgtcatcaactggtgatctgacgtcagcaggactgaaaaatccatgtgacggacagcatat cactgccaaccatagtcttttcttctcacaccccgatccctccaagtttatagagtgcggcattgcaggtgacgcctacg tgctcacatgtccatctggactcatttggaaccagtacaacaccacatgcgtctctccctatgcgtcaagtctcgtcatt caaggaaattaa |
|
Protein
| Protein ID | pfu_aug2.0_2149.1_32069.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2149.1_32069.t1 MKLAIVVVLCVATVQALSRVRRQGGQLPNCVDNWANVPNPCKNNPQNIVYFAHPRDTSKFIQCDAMGQMYIIQCPENTIF SSATRSCVAPVTTAACGPDGLVNILPCPDRLVWDETRYSCVYKSTLAGGAKPTSSTGDLTSADRLVWDETRYSCVYKSTL AGGARPTSSTGDLTSAGLKNPCDGQHITANHSLFFSHPDPSKFIECGIAGDAYVLTCPSGLIWNQYNTTCVSPYASSLVI QGN |
|