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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2149.1_32064
Locus scaffold2149.1 : 60947 ... 63225 : -
To GenomeBrowser scaffold2149.1:60947..63225
Genes list of scaffold scaffold2149.1
Synonym pfu_aug1.0_3822.1_37718

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_2149.1_32064.t1 1 1 7tm_1 68 306 5.5e-24 84.6 2.6e-27 5.5e-24 84.6

Transcript
Transcript IDpfu_aug2.0_2149.1_32064.t1
Definition-
>pfu_aug2.0_2149.1_32064.t1
atggatttaaaatggagcatgccctcaatttttgacgaacgtaatgtttcgcttgaggagtcttcatatgagagaacagg
gccagaaaagattcctgccttcgttttcacggtcacgctcacagtaataggaataatcggaaattcacatgccatataca
tctacctgcaaaggtactgcaaacaagagaaacaacagacatctgaaaagcggaatccgtactatgtcttcgcccttagc
cttgcctttatcgatatgataacctgcctcgtaattccaccattggataacttctacatgagtatggatttcacaccctt
gtcaaacaacatgtgtaaactagttcgatatgtccagtacgtcattcaaatcagtagcgtactccacatcgttcttataa
gcattcactgctggcgacaagtctgttatcaacagaaatcacagataaacgggacacaatccatcaagttctgcctttcc
ttcgtcgtcatagctgcgatagctagcttgcccgttgtcctccttgcagggaatatagccggagacgtggatgggaaaat
ggggccgcactgtgtcgtcggtgaaaacaacccggactcactatttctcaaggtcaccatgggaatcttcgctgctgctt
ttgttacctgtctgttcattatcttcacgtcgtattttgctttaattttgttcatttggcgaagcaagaatgcaaacgct
gagaaatggaaaacaacaatgacccttattataattactgtgttcttcgttattgctcatattccttacatgattcttgc
agtcctaaccgttgcaaacaaggacttcaaaaagaatttgagcagtgccggtattgctgctcacaggcttttcattcgtt
tcccttttctaaataatgtcgtaaatcctttcatttacggtctaagagatatcgagttccgtaacaaggtacttgagatg
tacggatgcatgaaacgtacaagacccaagaacccgacaatgccgtaa

Protein
Protein IDpfu_aug2.0_2149.1_32064.t1
Definition-
>pfu_aug2.0_2149.1_32064.t1
MDLKWSMPSIFDERNVSLEESSYERTGPEKIPAFVFTVTLTVIGIIGNSHAIYIYLQRYCKQEKQQTSEKRNPYYVFALS
LAFIDMITCLVIPPLDNFYMSMDFTPLSNNMCKLVRYVQYVIQISSVLHIVLISIHCWRQVCYQQKSQINGTQSIKFCLS
FVVIAAIASLPVVLLAGNIAGDVDGKMGPHCVVGENNPDSLFLKVTMGIFAAAFVTCLFIIFTSYFALILFIWRSKNANA
EKWKTTMTLIIITVFFVIAHIPYMILAVLTVANKDFKKNLSSAGIAAHRLFIRFPFLNNVVNPFIYGLRDIEFRNKVLEM
YGCMKRTRPKNPTMP

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