Gene
| Gene Model ID | pfu_aug2.0_214.1_13807 |
|---|---|
| Locus | scaffold214.1 : 247345 ... 255347 : + |
| To GenomeBrowser | scaffold214.1:247345..255347 |
| Genes list of scaffold | scaffold214.1 |
| Synonym | pfu_aug1.0_39690.1_34135 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_214.1_13807.t1 | 2 | 1 | AFG1_ATPase | 90 | 442 | 0.0 | 358.7 | 0.0 | 0.0 | 341.5 |
| pfu_aug2.0_214.1_13807.t1 | 2 | 1 | Bac_DnaA | 152 | 273 | 9.9e-06 | 25.3 | 5.0e-05 | 0.083 | 12.5 |
| pfu_aug2.0_214.1_13807.t1 | 2 | 2 | Bac_DnaA | 386 | 437 | 9.9e-06 | 25.3 | 0.0006 | 0.99 | 8.9 |
| pfu_aug2.0_214.1_13807.t1 | 2 | 2 | AFG1_ATPase | 468 | 496 | 0.0 | 358.7 | 3.9e-06 | 0.0065 | 15.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_214.1_13807.t1 | gi|676475148|ref|XP_009060379.1| | hypothetical protein LOTGIDRAFT_183409 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_214.1_13807.t1 | gi|524873013|ref|XP_005093260.1| | PREDICTED: lactation elevated protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_214.1_13807.t1 | gi|196006281|ref|XP_002113007.1| | hypothetical protein TRIADDRAFT_25679 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_214.1_13807.t1 | gi|541990105|ref|XP_005445819.1| | PREDICTED: lactation elevated protein 1 [Falco cherrug] | 0.0 |
| pfu_aug2.0_214.1_13807.t1 | gi|572311109|ref|XP_006621290.1| | PREDICTED: putative ATPase N2B-like [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_214.1_13807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_214.1_13807.t1 atgagagaattgtctatgaatttaacaatctttactatatttaccaaccatctatattatttgataggaaaagtattggt tgacaattcagctcaaaacaagttgagtgaagctggcacagggagtgaaagaacacctacaggtactggttctctgaacc agtcgagtaacgcggccacagggagtgaaactacagcatcctctggcactagttctctgaaccagtcgagtaatgctatt acagggagtgaagtgacaggcaccggtcctctgtcagtataccaacaaaggatagcgttaggtcagctacagtatgacag tcatcaactcagtattgtacagaatttagaggacttgcatcatgaattacagtcattctcaccgtccaaaccaccctcct ttatttctaaggcctttggctttggtcagagaactgaagagaaaccccctaaaggtctatacctctatgggaatgttgga actggtaagactatgctgatggacctgtttttcaagcattgtaaagtgaggaggaaacagagggtacactttaacagatt tatgctcgatgttcataaaagggtacatgcagtgaagaagaccatgccatctggaagagatgtaaagaagaaccagtcat acgacccgatacttcctgtagcaagggagataagtgaggaaacatggctgctttgctttgatgaatttcaggttacagat atagctgatgctgtgatattaaagaaactttttaccgagctttttaataacaatgttgtagtagtagctacctcaaatag agcccctgaagatttgtacaaaaatggcttacaaagaggcaatttcctaccttttatagatgtgctgaagagttattgta aagttttaccattggactctgggattgactacagaatggaatgtcttccatccgcagggaaaatctacttcataaaacca gagggaaatgctgatgaagatttggataaaatactcaaagaattatcagaggaggaaggaaaagatgttgaacctcgtgt gctgactattttggggcggcagttaaaattaccggtaacatgtggtagagtcttggatgctacatttgatgccatgtgta aacaggcccttggtgctattgactatcttgaaatcagtaaggagtttgatactgtgatactgagggatataccgaggatg agtctctttaataagtcagaggccaggagattcattactatgattgatacgctctatgacaaccaggtacgattagtttg ttcagccgaggccagtcctaaggaactgtttggtgctggtcagataagtcagagagatcatgaggccaatatgaacctaa tggacgacttaggtatacagcagaaatcagacttggcccaggctagtatatttactggagaagaagagttatttgctttt gaaagaactgtttcacgacttgctgaaatgcaaacggaggaatactggaatctacgaaaaactctagctcaacactctaa tagtgaggtcactaatcatcgtgataattcttga |
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Protein
| Protein ID | pfu_aug2.0_214.1_13807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_214.1_13807.t1 MRELSMNLTIFTIFTNHLYYLIGKVLVDNSAQNKLSEAGTGSERTPTGTGSLNQSSNAATGSETTASSGTSSLNQSSNAI TGSEVTGTGPLSVYQQRIALGQLQYDSHQLSIVQNLEDLHHELQSFSPSKPPSFISKAFGFGQRTEEKPPKGLYLYGNVG TGKTMLMDLFFKHCKVRRKQRVHFNRFMLDVHKRVHAVKKTMPSGRDVKKNQSYDPILPVAREISEETWLLCFDEFQVTD IADAVILKKLFTELFNNNVVVVATSNRAPEDLYKNGLQRGNFLPFIDVLKSYCKVLPLDSGIDYRMECLPSAGKIYFIKP EGNADEDLDKILKELSEEEGKDVEPRVLTILGRQLKLPVTCGRVLDATFDAMCKQALGAIDYLEISKEFDTVILRDIPRM SLFNKSEARRFITMIDTLYDNQVRLVCSAEASPKELFGAGQISQRDHEANMNLMDDLGIQQKSDLAQASIFTGEEELFAF ERTVSRLAEMQTEEYWNLRKTLAQHSNSEVTNHRDNS |
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