Gene
| Gene Model ID | pfu_aug2.0_204.1_13782 |
|---|---|
| Locus | scaffold204.1 : 49056 ... 68323 : + |
| To GenomeBrowser | scaffold204.1:49056..68323 |
| Genes list of scaffold | scaffold204.1 |
| Synonym | pfu_aug1.0_7553.1_31408 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lactase-phlorizin hydrolase-like | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_204.1_13782.t1 | 4 | 1 | Glyco_hydro_1 | 29 | 316 | 0.0 | 868.6 | 0.0 | 0.0 | 376.0 |
| pfu_aug2.0_204.1_13782.t1 | 4 | 2 | Glyco_hydro_1 | 324 | 386 | 0.0 | 868.6 | 2.0e-22 | 9.9e-19 | 66.8 |
| pfu_aug2.0_204.1_13782.t1 | 4 | 3 | Glyco_hydro_1 | 408 | 606 | 0.0 | 868.6 | 0.0 | 0.0 | 308.1 |
| pfu_aug2.0_204.1_13782.t1 | 4 | 4 | Glyco_hydro_1 | 606 | 727 | 0.0 | 868.6 | 6.60012e-42 | 3.2e-38 | 131.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_204.1_13782.t1 | gi|260833674|ref|XP_002611837.1| | hypothetical protein BRAFLDRAFT_123363 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_204.1_13782.t1 | gi|585688741|ref|XP_006820733.1| | PREDICTED: lactase-phlorizin hydrolase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_204.1_13782.t1 | gi|676488591|ref|XP_009064666.1| | hypothetical protein LOTGIDRAFT_207250 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_204.1_13782.t1 | gi|585688771|ref|XP_006820740.1| | PREDICTED: lactase-phlorizin hydrolase-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_204.1_13782.t1 | gi|676488588|ref|XP_009064665.1| | hypothetical protein LOTGIDRAFT_131894 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_204.1_13782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_204.1_13782.t1 atgatgaaccgtttcgggctgtcgatgctctccgttcttgttgctttggtaacagctgcagacgacacaactttttacta tggcgatttcccgtcagattttgcctggggaactgccactgcagcgtaccagattgagggggcttggaatgaagacggta ggggacctagtatctgggacacattttctcacaccaagggtaaaatcgtggacaattctaatggcgaccaggccgccgac tcataccataaatacaaggaggatgttcaactcttgaaaaaactaggggtgacacactaccgcttttcgatatcatggag ccgagttctgaccaatgggagcgtgtcctccagaaaccagaagggaatagattattacaacaatctgataaaggaactta tcgccaacaacattgttccctttgtcaccttgtatcactgggatctaccacaaccgctagaagatatgggaggctggccc aatagaaagatcgtggactattttgcagcatatgcagatttcgtattcagtgaattcggatcaaaggttaaacattggat cacctttaatgagcctagtgtatttcttacccttggatatggtaatggtgagcatgcgcccggaaaaactagtgcaccgg gaacagatccttacctcggagctcatcacgtggttctcgcgcatgcgcaagcatacgatatttacaatagaaaatacaga gcacgtcaaggaggtcgagttggaataacactgaatgtggactggaagcagccaaaaacattagcagaagcggatggcaa tgcggcacaaaggtcattggaattcttccttggaatatttgctaaccccattttccttgacggcgactaccctcaggttg tgaaagacacagtggcagcaaagagcacccgccaaggactgagtcagtccagactacctacatttacacctgacgagata gccaaaaataaagccatcaacttagaccggtgtaacgtgagcgggtacttcctgtggagtttgatagacaattttgagtg ggcccgtgggtacactgagaggtttggcatcgttaaggttgactatgagaggggcggtagggacaggacccccaaacaat cctatcacttctacaaggacctcatcaagaggaacggatacgctcctgattgggacaccatgtacatacatcaagaccta gaagacagagatgatttcctcacggacatatttccgcgtgactttgcctggggtacggcgacgtcggcttaccagataga agggggatggaacgaagacggtaaaggaccgagtatatgggataagttttcacatgacggtaggatagctaaccgtcaga caggggacgtggcctgtgacagctatcataaatacagagaagacgtcaaaatgctaaaaatgataggggtcagccattac agattttctatcgcctggagccgagtaatggctgacggtacactgaggacggtcaacgctaagggtgtccagtattacaa caacttgattgacgaactcctggccaacaacatagaaccaatggttactttgtatcattgggacctaccactggccctac aggacctcggaggattccagaatgacagcattgtggactactttaacgactatgccaggttctgcttctccatgtttggg gaccgggtgaagctttggatcacatacaacgaagcatttgtagtatcctggcttggatacggtataggagttttcgcccc tggagtaagcagtgctgacaccggtgtctacaaggtggcgcataacatcataaggtcaaggtcagactggttgcgtgtaa atccatggggcttacgtcgtctgctgaagtgggtcaaagatcgctatggtaacccgccagtctacgtcacggagaacgga gtatcagacgacggagaaattcaggatgaatctaggtcaaggttttaccgtctgtacattaacgaaatgctcaaagctat aaagagagacggctgtgacgttaaaggatacatggcgtggtcacttatggacaattttgagtggactagcggattcacac agaagtttggattgtttaatgtcaactttgacgatcaaaatcggccaagaaagcccaaaaactctgttagtgcatactca aaaatcatcagcgataatggattcccgctatcctga |
|
Protein
| Protein ID | pfu_aug2.0_204.1_13782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_204.1_13782.t1 MMNRFGLSMLSVLVALVTAADDTTFYYGDFPSDFAWGTATAAYQIEGAWNEDGRGPSIWDTFSHTKGKIVDNSNGDQAAD SYHKYKEDVQLLKKLGVTHYRFSISWSRVLTNGSVSSRNQKGIDYYNNLIKELIANNIVPFVTLYHWDLPQPLEDMGGWP NRKIVDYFAAYADFVFSEFGSKVKHWITFNEPSVFLTLGYGNGEHAPGKTSAPGTDPYLGAHHVVLAHAQAYDIYNRKYR ARQGGRVGITLNVDWKQPKTLAEADGNAAQRSLEFFLGIFANPIFLDGDYPQVVKDTVAAKSTRQGLSQSRLPTFTPDEI AKNKAINLDRCNVSGYFLWSLIDNFEWARGYTERFGIVKVDYERGGRDRTPKQSYHFYKDLIKRNGYAPDWDTMYIHQDL EDRDDFLTDIFPRDFAWGTATSAYQIEGGWNEDGKGPSIWDKFSHDGRIANRQTGDVACDSYHKYREDVKMLKMIGVSHY RFSIAWSRVMADGTLRTVNAKGVQYYNNLIDELLANNIEPMVTLYHWDLPLALQDLGGFQNDSIVDYFNDYARFCFSMFG DRVKLWITYNEAFVVSWLGYGIGVFAPGVSSADTGVYKVAHNIIRSRSDWLRVNPWGLRRLLKWVKDRYGNPPVYVTENG VSDDGEIQDESRSRFYRLYINEMLKAIKRDGCDVKGYMAWSLMDNFEWTSGFTQKFGLFNVNFDDQNRPRKPKNSVSAYS KIISDNGFPLS |
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