Gene
| Gene Model ID | pfu_aug2.0_1979.1_31991 |
|---|---|
| Locus | scaffold1979.1 : 50446 ... 70335 : + |
| To GenomeBrowser | scaffold1979.1:50446..70335 |
| Genes list of scaffold | scaffold1979.1 |
| Synonym | pfu_aug1.0_57137.1_20224 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1979.1_31991.t1 | 1 | 1 | CARD | 126 | 198 | 8.7e-06 | 25.4 | 2.2e-08 | 2.5e-05 | 24.0 |
| pfu_aug2.0_1979.1_31991.t1 | 1 | 1 | NACHT | 282 | 425 | 1.9e-11 | 43.8 | 3.5e-14 | 4.0e-11 | 42.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1979.1_31991.t1 | gi|524881191|ref|XP_005097250.1| | PREDICTED: uncharacterized protein LOC101849611 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1979.1_31991.t1 | gi|676447580|ref|XP_009051454.1| | hypothetical protein LOTGIDRAFT_152683 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1979.1_31991.t1 | gi|260814664|ref|XP_002602034.1| | hypothetical protein BRAFLDRAFT_82623 [Branchiostoma floridae] | 2.0e-25 |
| pfu_aug2.0_1979.1_31991.t1 | gi|260787593|ref|XP_002588837.1| | hypothetical protein BRAFLDRAFT_99537 [Branchiostoma floridae] | 7.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_1979.1_31991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1979.1_31991.t1 atgaaggggccgaacaagaccccgtattctctaccgtccgtggcacctagtattcctccgcgtttcctggatccttttcc gagaaaggaagcggaagttcatgccgtgaaagaaagaatccagaagccttctgacaccagctatagaaagtttgaaggtc attatgagagtgaattcattatatatccaacgtctacgataatcggactgcccataggagaatattccgcaaggaatgtg gaagccatatgtaatcacgcggaagacatgtggaagtgtatggaaatacacggaaattgtttaatgtggaaccatttccg tataaagcttccatgcataccaccagaagataaggctgtactaatgaaaacgtttaaactgttcgtcgacaatgttcaag cagaagacatcgtagatcgtctgcaacagaatcaggtcataaagttcagtgatcgtcaggaaatttttgctcactccaag aacacggagcgcatgcagatgatcctagacaagattctcaagtccaaactgtcgtatgccttcaaagccttatgtgattc catcaaattcaagtacaaaaagatgtacgaaaacgtgatgcagattaggaaagacacctacaaacatggcgtcagggaga cagtggacgtggtaggagtgtgtacagacgccttgactagttcctacgccaacacatacgccaagtgttcaccttttcct tggaatgaaaccattgtggtcaacgccagggacatgtatactccactggacattctggacaatgacgggcgaaaaattca tttgagtgaatttttgccatctaattcccatggaaaaggacagaggataatcctggagggatcaagcggaagtggtaaaa ccatactgctccacgtggtggcttacctgtgggcaacacagcggaaatacttcaagaaccattatcctcttctcatccat ttcaacttacaagaactcgacggaaagtttgaggacgccatctgcaggaaattactgcccgatagtttcagacttaatcc tgcagaattcttttccttgctggaagccaattcgcgagatgttgtcatgttgattgacggatacgatggagggctaggtc atgaggaactggaggatatcctccttggtgagagacttcgccaagctacagtcattgttgcaatgaatccagaggttgtt tccaatccgggatttacaccagattctaggtactttaatttaggatttagcaggaacaatgtcacacggttcatgaaaac ttgcatgtaccacttcaaattcaaccctgaacaccacgagcgcttattcgattcaatcaatgacacatcatggaaattgt atccaaatttgacactacctctgacatctctcctggtttttgccatctaccagtcttcaaagaaatcaaatgtactggat atctcgggtacaacatcattacttgaagcatacggctttgcgatggccacacaattttgcaaacgacagaagttggacat aataggtctagaatttccagaggaggttgtacgtgcgatcgatcagctgagttcattcgcttacaacaatcttatggaag acgaacggatgttcactatacaagaaataacaatggacgctcaaaatgccataattctcaaacttggagcattcctgaaa ttgacgccgaaatcaaaatggaatttgacttgcactttgatgcatgatttccttgcagcccggtatatatccgacttcgt tctagatgagatgattacgattataaaggaccaccgcattgtcaaacaatccaagtataactacctcgttatgctgcttt gtggactgtacagaaacgactatgacacgaaagtcattcactctatcttttcagaaatggcggttcaaaatgttcgtctg actcgtgttcagagccatgattccaaggcgtcacaacaggatgttcggccaccaagcggtaaaataacagactttctcca aagtttacaaagtctttacgaaacgaaatttcgcgatgatgcctgcacagccttagcgcagtctttccctccgaggacag ttattcgacgtgatggcctgattccagccaaagctttgattgcgcttccgaaaatcatgctttccgaaagtagtcggatt acacaaatagaaatccatctcttacctgtttttctgtaccaatcagacctctacctggaattagctggagaaatatcaaa aagcaaaattcttcaacagctgaaaattatttggcactcgatggagatgatggcgaaatttcttgacacgttcatgtcga atgacgtcagtaaaaagcccgtcaagcaagtatcagcatcaacttgggcaaccttgcaaagcgcatgtcaaaatttgaca aaagctgaagagttctccttccttcatagtaaggtagccacagtttcatactttgtgcttcagcatttaccaaattcctt gaagatgttgagtttttcgggatgtgtgcttaacatgatgtgtgctacagaagtcagtgccaaacttgaacacgcaactg ctctggaaaaactggacataagcaacactggacttgtaggttcagaattcgtggccgttctacaagggctaaaactatgc aatacaatacgacatctgaaactatgtggtgcaaaacttgaccgagctggggttcttaacttgtcagagtgtttaaagct aacacgtacgctagaaattctcgatctaagtaattgtgaactaagtactgacatgtgtaaaaagctggccgacgccattg tagaaaatagaagtctacaaaaactggtcttgaaaagtaccaaagtttcaactgaaggacggcaggctataagtcaaccc aaacaggagcaagtacaagtgataggcctagaggacatgacgtacgcaatttacgctctaaatgtctcgtga |
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Protein
| Protein ID | pfu_aug2.0_1979.1_31991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1979.1_31991.t1 MKGPNKTPYSLPSVAPSIPPRFLDPFPRKEAEVHAVKERIQKPSDTSYRKFEGHYESEFIIYPTSTIIGLPIGEYSARNV EAICNHAEDMWKCMEIHGNCLMWNHFRIKLPCIPPEDKAVLMKTFKLFVDNVQAEDIVDRLQQNQVIKFSDRQEIFAHSK NTERMQMILDKILKSKLSYAFKALCDSIKFKYKKMYENVMQIRKDTYKHGVRETVDVVGVCTDALTSSYANTYAKCSPFP WNETIVVNARDMYTPLDILDNDGRKIHLSEFLPSNSHGKGQRIILEGSSGSGKTILLHVVAYLWATQRKYFKNHYPLLIH FNLQELDGKFEDAICRKLLPDSFRLNPAEFFSLLEANSRDVVMLIDGYDGGLGHEELEDILLGERLRQATVIVAMNPEVV SNPGFTPDSRYFNLGFSRNNVTRFMKTCMYHFKFNPEHHERLFDSINDTSWKLYPNLTLPLTSLLVFAIYQSSKKSNVLD ISGTTSLLEAYGFAMATQFCKRQKLDIIGLEFPEEVVRAIDQLSSFAYNNLMEDERMFTIQEITMDAQNAIILKLGAFLK LTPKSKWNLTCTLMHDFLAARYISDFVLDEMITIIKDHRIVKQSKYNYLVMLLCGLYRNDYDTKVIHSIFSEMAVQNVRL TRVQSHDSKASQQDVRPPSGKITDFLQSLQSLYETKFRDDACTALAQSFPPRTVIRRDGLIPAKALIALPKIMLSESSRI TQIEIHLLPVFLYQSDLYLELAGEISKSKILQQLKIIWHSMEMMAKFLDTFMSNDVSKKPVKQVSASTWATLQSACQNLT KAEEFSFLHSKVATVSYFVLQHLPNSLKMLSFSGCVLNMMCATEVSAKLEHATALEKLDISNTGLVGSEFVAVLQGLKLC NTIRHLKLCGAKLDRAGVLNLSECLKLTRTLEILDLSNCELSTDMCKKLADAIVENRSLQKLVLKSTKVSTEGRQAISQP KQEQVQVIGLEDMTYAIYALNVS |
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