Gene
| Gene Model ID | pfu_aug2.0_1979.1_31989 |
|---|---|
| Locus | scaffold1979.1 : 17011 ... 32465 : - |
| To GenomeBrowser | scaffold1979.1:17011..32465 |
| Genes list of scaffold | scaffold1979.1 |
| Synonym | pfu_aug1.0_7640.1_67718 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1979.1_31989.t1 | 1 | 1 | Tfb4 | 8 | 246 | 0.0 | 239.9 | 0.0 | 0.0 | 239.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1979.1_31989.t1 | gi|524888177|ref|XP_005100664.1| | PREDICTED: general transcription factor IIH subunit 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1979.1_31989.t1 | gi|115609530|ref|XP_791329.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1979.1_31989.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1979.1_31989.t1 atgaatgatgaagctgtttccagtcagctggtcattgtacttgatacaaatccagtctggtggggtcaaaggtcaaaccc aggtgatattggccagtttggtttatcagaatgcctggactgtctgatggtatttgctaattctcatcttatgatgagtc atacaaataaactggttgtcatggcagcacattcgaatgaaagtgtctttctgtatccaaaacctgcacaaaaatcagtc gccatggaaatagatttggttgatgatgaagctaatccgaatggtgatggacgatatgaactttttacacagctagatga tcaaattaaaaacggtgtcaaagatcttgtacatagaggtatggatggacaattatactcagattcattgattgccggag ctctgtctatggccctttgttatattcacagaacagaaaaaaatcatgagcatggagaaaagatatcaagtagaattttg gtgataaaggggtcagaagacaatgccgaacagtacatgaatctgatgaacgtcatattcaccgcacaaaaacagaatgt tgtgatagatgcttgtattcttgacaatgattctgggctgttacagcaggcatgtgacattacaggaggtatttatctta agatatcacacctgtctggtctcctacagtatctattgtgggtgtttttgcctgatccaacagagcgtcacaaattaaca ctgccacctaaagtccagttttctgtaacttcagtccaatatgtggtacatgccagacaacttttaagatag |
|
Protein
| Protein ID | pfu_aug2.0_1979.1_31989.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1979.1_31989.t1 MNDEAVSSQLVIVLDTNPVWWGQRSNPGDIGQFGLSECLDCLMVFANSHLMMSHTNKLVVMAAHSNESVFLYPKPAQKSV AMEIDLVDDEANPNGDGRYELFTQLDDQIKNGVKDLVHRGMDGQLYSDSLIAGALSMALCYIHRTEKNHEHGEKISSRIL VIKGSEDNAEQYMNLMNVIFTAQKQNVVIDACILDNDSGLLQQACDITGGIYLKISHLSGLLQYLLWVFLPDPTERHKLT LPPKVQFSVTSVQYVVHARQLLR |
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