Gene
| Gene Model ID | pfu_aug2.0_1957.1_25219 |
|---|---|
| Locus | scaffold1957.1 : 8296 ... 13225 : + |
| To GenomeBrowser | scaffold1957.1:8296..13225 |
| Genes list of scaffold | scaffold1957.1 |
| Synonym | pfu_aug1.0_7686.1_53015 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1957.1_25219.t1 | 8 | 1 | zf-C2H2 | 702 | 718 | 1.5e-10 | 40.7 | 5.7 | 12000.0 | -3.0 |
| pfu_aug2.0_1957.1_25219.t1 | 8 | 2 | zf-C2H2 | 894 | 904 | 1.5e-10 | 40.7 | 0.69 | 1500.0 | -0.1 |
| pfu_aug2.0_1957.1_25219.t1 | 8 | 3 | zf-C2H2 | 956 | 977 | 1.5e-10 | 40.7 | 0.00011 | 0.22 | 11.9 |
| pfu_aug2.0_1957.1_25219.t1 | 8 | 4 | zf-C2H2 | 994 | 1015 | 1.5e-10 | 40.7 | 0.01 | 22.0 | 5.6 |
| pfu_aug2.0_1957.1_25219.t1 | 8 | 5 | zf-C2H2 | 1021 | 1042 | 1.5e-10 | 40.7 | 5.0e-05 | 0.11 | 12.9 |
| pfu_aug2.0_1957.1_25219.t1 | 8 | 6 | zf-C2H2 | 1047 | 1069 | 1.5e-10 | 40.7 | 0.00013 | 0.28 | 11.6 |
| pfu_aug2.0_1957.1_25219.t1 | 8 | 7 | zf-C2H2 | 1078 | 1100 | 1.5e-10 | 40.7 | 7.7e-05 | 0.16 | 12.3 |
| pfu_aug2.0_1957.1_25219.t1 | 8 | 8 | zf-C2H2 | 1106 | 1129 | 1.5e-10 | 40.7 | 9.1e-07 | 0.0019 | 18.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1957.1_25219.t1 | gi|637366404|ref|XP_003229110.2| | PREDICTED: gastrula zinc finger protein XlCGF52.1-like, partial [Anolis carolinensis] | 2.0e-18 |
| pfu_aug2.0_1957.1_25219.t1 | gi|746844059|ref|XP_011052278.1| | PREDICTED: endothelial zinc finger protein induced by tumor necrosis factor alpha-like isoform X3 [Acromyrmex echinatior] | 3.0e-17 |
| pfu_aug2.0_1957.1_25219.t1 | gi|551507826|ref|XP_005805442.1| | PREDICTED: zinc finger protein 184-like [Xiphophorus maculatus] | 3.0e-17 |
| pfu_aug2.0_1957.1_25219.t1 | gi|363746766|ref|XP_003643792.1| | PREDICTED: zinc finger protein 879-like [Gallus gallus] | 6.0e-17 |
| pfu_aug2.0_1957.1_25219.t1 | gi|194740976|ref|XP_001952965.1| | GF17536 [Drosophila ananassae] | 9.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_1957.1_25219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1957.1_25219.t1 atggagaatacaatgaagaagtcgtgttatgtcaagctcgaaccttttgaaagaattgaatgttcaagacagcatcttca tgttctaggaaaatcaagtttagatgtgaaaaatactcattcagaagataatcccaagaaaaccccttgcaacgaaaaag atagatgcgttcaatgcactattatatacgtcggtgtcaaagaagaaggacaggaaagcaattatatgggatcggattat ccagaaataggagataaagacataatgttcaaaatgtatgataatggaactaaccactcacatgaataccaaagagtacg ttcaaacgatgtcaaaaaggaagtgttcgataattatttagaggaaaatgttctcgaattgactattgctcataatacaa ccgcaagtgataaaagaaatgaaactatggaacatgaaatgaaaacggaagaaaatggaaggaaagttcaatcgatggag aaacgaaagttatataatgacgattctatgagcgaatcgggaaaagacggatgtttaaaaaagaaatgttcaaacgaaac aggagatcaaagtgacgaaattccaagtttttcctttgataccgagtttatcaataaacaagactccaaaactcatgatg gacgacctgagttgcaggcatttgcacattccactactgttactcggacaacaaagcaaaacaccattacacctcaaacc tgtaatcataaatctaacacttctcaatccctatcacttacagatccaattccgctcatacccattcctatgtctcaagc agaaaccctcaatgttcccaatcccacatcactgataagcgatactgtgatgaacaaacattcatctaacgtgacaaatg tacctgattccgcattcaataatagtattgttcttcaatcaccaacaggtaatctttattatccattatcaacaaatact gttattgacaaagtgccaacatatagcaacatgatgattcagccttcacagctcagcaaaattggttgtacacacaatct gcggactggctttatgttggtagtgccctctggaataagtaatgccagtaccggttccaatacgaaacataatactcttt gcaatgttgttgaacatctgcagcagaaagcacgtgtaccgcaatcagactgtagtgaaggaggattgactaaaacaaca aatgttcaaagaaccattatcaacgaaaacgggacaccaacagaaatcgccgtagtatctcccgttgtaaacaataaagg cagttatgtcaatgataaaaagaagaaaacaaatgtaaagaatggtaacgacaattcactaaacggatgtccagctattg ctcctgccaacaaagtttacaacccaataggagacatacataagaaactaagtcaagatgcgaacctgatgcaaagtaat tataatcgttcaagcacggtgtcagggaaagaggttatccagacaaaggagtcaagtggatcgagtacagaatttagtgg aatacaaaggcaaggctcaagcaatggtgttttattccagaagaaaagaaatgaaaggttaagtcaagcgaaggcagtat attggcaagcctcaagcaatggtgctttatgccagaatacaaagaatgaaatgttaagtcaagctaagacagtgtgtagt gaaaaacaaaggcaaacctcaagcaatggtgttttatatgataagaaaagaaaagagatgacagtcgaaaaatctgcatt aaggaaacaagggcgtaacgaaaacgccaaaaaagatcaacaacgacgaaaacgtacatcaagatcgagaaatggacaaa aatcgaaaaattacagattaaccgcttctggctctaaacaagatacaaattatccaattgatgaatcagaagaagaaagg aaaatggaaatgcttgataaagaagggagggctctggaagacaaatggaaatatatgtacggagaggaagacacattcga aaatctcagtgatatacataaagtttggagaatgtgtgtgtgtgacgacagcgaggctttcggacaatatactaaatacg tcgagtggaattgttatatgagatgcatttattgtaatgtgatatttgaacgctttgcagcctatttgatgcatagttta agtggaacaaaatgctcagcaaaatttttccatggagaaggtggggacagagtgtgctttccatgcaataagatcggctt aaagaagcacggatggataaggcatatgttgcagaagaaatcccatggagggcataaatgtgcttacatccctaagctga aagttttggagagaatgtgtagggaaagagaatctgcagcagctcatgatcttagccaagacacagaaggtcattcagaa ggaacatcaagaaatggaaaatcttcagcagcttatagtaaagacaaagacaattattctggggaaacgtctcaagttga acaatctctaacagctcaaaacatagaaacggaaggtacccccgaggggacatctaggaatgcagctcatggggaagaca cagaaggtcattctgaaggaacatctatggatgaacaatctccactggatcaatccggtgcctttttccacaggatagtt gaaagagaagaggagtggcataacacttttgaacctggatttcaatgtaaagcttgtactcgtgctacaaatgtctttat ctctcttttcgaagcagtgggccatataaagaaaacgcacacaaatgaagaagaaacttgtttcaaatatagattgaaac aacaattcaaaggcaaagatattatcacagtaaaacatgcgaataagtgtagagaggggttcctgtgttctttatgtgga atatcttacaaaacggtagaatctttacgcaggcatttagtattagtgcacaaagatgtgcctccgaaagagtttggact tgaagattcaagtttgctttgtccccattgtggtagaacgttctctatacatagaaagacgacatatcgaaatcacttac tgatacactctgaccctgtgacgtgtccaaaatgtaaccaagtttgcaaaaacaaggccacgtatcttcgccatgcaaag aaacacagagatccgattttcacctgcaagaaatgtgggaaaacatttgaggagaggcatcaatacgctcaacacaagca caagcataaagttaaagaaaacgggagacaatttaaatgcgaaatatgtgacaaagcttttatgttcaagcatcatttaa ttacccattcagtggtccattctactaaccgtaagtttgcatgtgacgactgtggaatgacattcaaattgaagcatcat ttgaaaaatcatttagaaagggcgtgtccaaagaaaaaatga |
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Protein
| Protein ID | pfu_aug2.0_1957.1_25219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1957.1_25219.t1 MENTMKKSCYVKLEPFERIECSRQHLHVLGKSSLDVKNTHSEDNPKKTPCNEKDRCVQCTIIYVGVKEEGQESNYMGSDY PEIGDKDIMFKMYDNGTNHSHEYQRVRSNDVKKEVFDNYLEENVLELTIAHNTTASDKRNETMEHEMKTEENGRKVQSME KRKLYNDDSMSESGKDGCLKKKCSNETGDQSDEIPSFSFDTEFINKQDSKTHDGRPELQAFAHSTTVTRTTKQNTITPQT CNHKSNTSQSLSLTDPIPLIPIPMSQAETLNVPNPTSLISDTVMNKHSSNVTNVPDSAFNNSIVLQSPTGNLYYPLSTNT VIDKVPTYSNMMIQPSQLSKIGCTHNLRTGFMLVVPSGISNASTGSNTKHNTLCNVVEHLQQKARVPQSDCSEGGLTKTT NVQRTIINENGTPTEIAVVSPVVNNKGSYVNDKKKKTNVKNGNDNSLNGCPAIAPANKVYNPIGDIHKKLSQDANLMQSN YNRSSTVSGKEVIQTKESSGSSTEFSGIQRQGSSNGVLFQKKRNERLSQAKAVYWQASSNGALCQNTKNEMLSQAKTVCS EKQRQTSSNGVLYDKKRKEMTVEKSALRKQGRNENAKKDQQRRKRTSRSRNGQKSKNYRLTASGSKQDTNYPIDESEEER KMEMLDKEGRALEDKWKYMYGEEDTFENLSDIHKVWRMCVCDDSEAFGQYTKYVEWNCYMRCIYCNVIFERFAAYLMHSL SGTKCSAKFFHGEGGDRVCFPCNKIGLKKHGWIRHMLQKKSHGGHKCAYIPKLKVLERMCRERESAAAHDLSQDTEGHSE GTSRNGKSSAAYSKDKDNYSGETSQVEQSLTAQNIETEGTPEGTSRNAAHGEDTEGHSEGTSMDEQSPLDQSGAFFHRIV EREEEWHNTFEPGFQCKACTRATNVFISLFEAVGHIKKTHTNEEETCFKYRLKQQFKGKDIITVKHANKCREGFLCSLCG ISYKTVESLRRHLVLVHKDVPPKEFGLEDSSLLCPHCGRTFSIHRKTTYRNHLLIHSDPVTCPKCNQVCKNKATYLRHAK KHRDPIFTCKKCGKTFEERHQYAQHKHKHKVKENGRQFKCEICDKAFMFKHHLITHSVVHSTNRKFACDDCGMTFKLKHH LKNHLERACPKKK |
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