Gene
| Gene Model ID | pfu_aug2.0_1912.1_08643 |
|---|---|
| Locus | scaffold1912.1 : 82936 ... 92061 : + |
| To GenomeBrowser | scaffold1912.1:82936..92061 |
| Genes list of scaffold | scaffold1912.1 |
| Synonym | pfu_aug1.0_3020.1_66550 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1912.1_08643.t1 | 1 | 1 | 7tm_1 | 12 | 269 | 6.6e-29 | 100.8 | 2.7e-32 | 9.8e-29 | 100.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1912.1_08643.t1 | gi|657785906|ref|XP_008320084.1| | PREDICTED: G-protein coupled receptor 161-like [Cynoglossus semilaevis] | 6.0e-21 |
| pfu_aug2.0_1912.1_08643.t1 | gi|597807642|ref|XP_007243686.1| | PREDICTED: histamine H1 receptor-like, partial [Astyanax mexicanus] | 8.0e-21 |
| pfu_aug2.0_1912.1_08643.t1 | gi|573902204|ref|XP_006638827.1| | PREDICTED: G-protein coupled receptor 161-like [Lepisosteus oculatus] | 9.0e-21 |
| pfu_aug2.0_1912.1_08643.t1 | gi|551512371|ref|XP_005807701.1| | PREDICTED: G-protein coupled receptor 161-like [Xiphophorus maculatus] | 5.0e-18 |
| pfu_aug2.0_1912.1_08643.t1 | gi|657542431|ref|XP_008276968.1| | PREDICTED: 5-hydroxytryptamine receptor-like [Stegastes partitus] | 1.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_1912.1_08643.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1912.1_08643.t1 atgtctcattcttccgatagagagattgagcaaacccaaactataacttgcaaaattgtgacttacctggtgaaggtgtt tgccgttgcatccaattcgtccattacccttgtagccattgaccggtatttatcaattatacattgtttgcgctacacgt cctggtcacaccgtacctacggaggactctcattatgctttgtatggttagaagccattttagttccggtacctgaactt ccggacatatctcaccctccctcttcatgccttcaacatttatccagcagtcttccttacgctgttttgatgacggtggc agtgtttctaataccgtttctacttatgtcattctgccatttaatgatcatcaaagtggctcgtgcacatgcgagaaaaa tttgtgacatacattcgcagatgaatcgtgcgcatgccacagcgccatccaatggaatcgtggctcttgcttgcgttgat ccggtgcgcaggttatctttaatgggacttcctaatgctaatacatgtgcaacaagacacaacgttgaccttgaacttta ttctttggagggcggatctaatagtacgtctggggaggaaaacagacttaagaaagaattcgtggccgtagttagactgt tatttcttatattcatattttgttgcgtgtggtgtccagttgttgttattgagatgacttattacacggataaaaggaat gcaacgggtaaaagtgagaataaagtattatgcaaattaacagtatgtctcgtcgccattcattgctcactaaatccgtt tttgtatgttctcaatgccaaacaatttagaaggcaactcttgaaccttatttgtgctccgaatgatagacgtgatgttg tacaaacaacaaaactcgttagcttaataaataatcgaaacaaaactaagcagcagtcaagtgttcattttcaaaatcgt aagtttcaaagtgaagaagacaaagatgaaggaactattttcactttatcgtcgcctcctttggacgaagtggagataag gaagcgaagacattttccaaagaaactccgatttacagaaaatgttatgattaaacctagcaatcaaatgtcaaaatctt tgtcatcgattccagagattgtgatagacccatccctgccaccaattgtatcacataacatgttttaa |
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Protein
| Protein ID | pfu_aug2.0_1912.1_08643.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1912.1_08643.t1 MSHSSDREIEQTQTITCKIVTYLVKVFAVASNSSITLVAIDRYLSIIHCLRYTSWSHRTYGGLSLCFVWLEAILVPVPEL PDISHPPSSCLQHLSSSLPYAVLMTVAVFLIPFLLMSFCHLMIIKVARAHARKICDIHSQMNRAHATAPSNGIVALACVD PVRRLSLMGLPNANTCATRHNVDLELYSLEGGSNSTSGEENRLKKEFVAVVRLLFLIFIFCCVWCPVVVIEMTYYTDKRN ATGKSENKVLCKLTVCLVAIHCSLNPFLYVLNAKQFRRQLLNLICAPNDRRDVVQTTKLVSLINNRNKTKQQSSVHFQNR KFQSEEDKDEGTIFTLSSPPLDEVEIRKRRHFPKKLRFTENVMIKPSNQMSKSLSSIPEIVIDPSLPPIVSHNMF |
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