Gene
| Gene Model ID | pfu_aug2.0_1912.1_08642 |
|---|---|
| Locus | scaffold1912.1 : 30376 ... 78850 : + |
| To GenomeBrowser | scaffold1912.1:30376..78850 |
| Genes list of scaffold | scaffold1912.1 |
| Synonym | pfu_aug1.0_44160.1_27060 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cd109 antigen | GO:0044699 GO:0048523 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1912.1_08642.t1 | 4 | 1 | A2M_comp | 120 | 120 | 4.2e-28 | 98.2 | 2.2 | 4600.0 | -3.5 |
| pfu_aug2.0_1912.1_08642.t1 | 3 | 1 | A2M_N_2 | 277 | 320 | 5.3e-15 | 55.4 | 0.0041 | 8.7 | 6.1 |
| pfu_aug2.0_1912.1_08642.t1 | 4 | 2 | A2M_comp | 290 | 319 | 4.2e-28 | 98.2 | 0.87 | 1800.0 | -2.2 |
| pfu_aug2.0_1912.1_08642.t1 | 3 | 1 | A2M | 553 | 569 | 3.1e-15 | 55.5 | 1.4 | 3100.0 | -2.2 |
| pfu_aug2.0_1912.1_08642.t1 | 3 | 2 | A2M_N_2 | 577 | 685 | 5.3e-15 | 55.4 | 3.1e-15 | 6.6e-12 | 45.3 |
| pfu_aug2.0_1912.1_08642.t1 | 3 | 2 | A2M | 812 | 887 | 3.1e-15 | 55.5 | 1.9e-13 | 4.1e-10 | 39.0 |
| pfu_aug2.0_1912.1_08642.t1 | 3 | 3 | A2M | 883 | 925 | 3.1e-15 | 55.5 | 8.4e-07 | 0.0018 | 17.8 |
| pfu_aug2.0_1912.1_08642.t1 | 3 | 3 | A2M_N_2 | 964 | 973 | 5.3e-15 | 55.4 | 2.6 | 5500.0 | -3.0 |
| pfu_aug2.0_1912.1_08642.t1 | 4 | 3 | A2M_comp | 1111 | 1210 | 4.2e-28 | 98.2 | 7.0e-25 | 1.5e-21 | 76.7 |
| pfu_aug2.0_1912.1_08642.t1 | 2 | 1 | Prenyltrans_2 | 1111 | 1181 | 5.4e-08 | 33.2 | 1.1e-09 | 2.2e-06 | 28.0 |
| pfu_aug2.0_1912.1_08642.t1 | 4 | 4 | A2M_comp | 1216 | 1294 | 4.2e-28 | 98.2 | 5.3e-07 | 0.0011 | 18.2 |
| pfu_aug2.0_1912.1_08642.t1 | 2 | 2 | Prenyltrans_2 | 1248 | 1281 | 5.4e-08 | 33.2 | 0.15 | 320.0 | 1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1912.1_08642.t1 | gi|532007616|ref|XP_005347635.1| | PREDICTED: CD109 antigen isoform X1 [Microtus ochrogaster] | 0.0 |
| pfu_aug2.0_1912.1_08642.t1 | gi|397476356|ref|XP_003809569.1| | PREDICTED: CD109 antigen [Pan paniscus] | 1.4013e-45 |
| pfu_aug2.0_1912.1_08642.t1 | gi|532007620|ref|XP_005347637.1| | PREDICTED: CD109 antigen isoform X3 [Microtus ochrogaster] | 1.4013e-45 |
| pfu_aug2.0_1912.1_08642.t1 | gi|114608134|ref|XP_518588.2| | PREDICTED: CD109 antigen [Pan troglodytes] | 7.00649e-45 |
Transcript
| Transcript ID | pfu_aug2.0_1912.1_08642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1912.1_08642.t1 atgtttttttatgcggctagtcaggcaggggatgcttactcctcccgggcacctcgtcccacctctagctttgcgggctc cgtcgatgctcaggctggtaaagacgttccaactctgatgaaggaaagctgttatccagacaaacaaaacaacttcaagg aacaacaggggacaatgagacgcgcaacagcacacacagaacggtccaaaaacacacagaaaggtctcaacagcacacac agaacggtccaaaaacacacagaaaggtctcaacagcacacacagaacggtccaaaaacacacagaaaggtcacaacagc acacacagaacggtccaaaaacacacagaaaggtcacaacagcacacacgagacagtcaaaaacacacagagaggtctca acagcacacacgagacagtcaaaaacacacagagaggtctcaacagcacacacgagacagtcaaaaacacacagaacagt ccaacgacacacacaggatattcttacattgtaacgttccctaggataatcaacaaggactttaacatcccaatctctgt acagatattgaagcccgtgggtccggtccggatcaccgcctctatagataacaataggaatgaggggtcagcggtggagg aggtcgggaaactcccaccagggcagtctgtcgggcgtcaatttattactttagatttagacgttccgccatttagttcc catggagatgaccggaagaaagaagaattcacattgactgttaccggaagtggtggtgtgacgtttagagaagagagaaa agtcagaatgactttttctgaaccgacattagatatcctactggataaaacacgatatcgaccgggcgatacagtgaatt tcttggtgtacggtcaatatccagatggttccatagtaaggtccccatactacatacatataaaggtccaaggtaacgat ataattagtattccgaagtcagaactgatcgagggcctgggtaagagaagtttggactacacgagcctcaagattaatgc tgacgtcatcgaggacgtcacaggtgagagtgtaatgaatgacatcaggacgtacgtggagtcgccgtacaactatattg atatcagctttgaccacgccggtaatgccgtcttcaagcccggtataccgtttgttacttctgtccaaggtaacgatata attagtattccgaagtcagaactgatcgagggcctgggtaagagaagtttggactacacgagcctcaagattaatgctga cgtcatcgaggacgtcacaggtgagagtgtaatgaatgacatcaggacatacgtggagtcgccgtacaactatattgata tcagctttgaccacgccggtaatgccgtcttcaaacccggtataccgtttgttacttctgtgaaggcatctaagtcagac aaatcgccattgacaaatctggagtcgagaatgaatatcactgcgtcatcaactacgtcatacagcggtggaatgacgcc atttgattctcagctctatgacatcccaatggatggcgtcattagactggcgtacaccatacctaaagacgctaaaagag cgaatttactcgctagataccagaagacgacaagatctctatacatgcgcagagcgaaatcaaagagtgacaacttcttg aagctacggcttccttctactgtgtctacggacacgctgccaagtgtcttcaatgctgaagcaacagaaccagttgataa tctgtttataatgatatttgatgatgagaaacttgtgtacaatgacgtcatcagcatgggcgggaagactaaaacagctg ttaccttaccagagatgaaaaaggccgagagttccctaagtttgatggggtattacgtcagacctgacggggaagttgtg gctgacctgattgaggttgcacgaggtgaacctacccaggaaaaggtttcgctgtcccttgacaaggcggaagcgagccc tgggtcaacaatgactttgtctgtagccacacctaactcctcatccctcgtcctcgtccatggcagggacaaacgactga gctccatgggtgatgataatagattcaaaatgtcttccggtggtggaaataatgaagacgatctcagagacaaatttcca tttgatgccgaggacgcattccagaaagcaaatttgttttacctatctgatgcaaacatcttcaagtatgtgccaaaaag cttatgcagacctcctcctgttgaaaaagagcccgtgctaattctgtatgccaagtatgggttaaagaccagtagatatc agccccttatcacatatcctaatctgtcagcactgatgatggaggcgaacgtccggagtcttggcagggaaacatggttc tcagatacacttattacacagaatggaaccagagtatcaactgaccgttcttacagagttcctctaacatacaccacgtg ggaagtcagcgccatgtcgttggacaaaacaaaacaaacgccatctaaagctgagttaaaggtaacatcacctttccata taagacttcaacttccaaattcagcgaaggccatggagcctacaatgttagctgctactgttatcaacaacctcccttac gatgctgagttaaaggtaacatcgcctttccatataagacttcaacttccaaattcagcgaaggccatggagcctacaat gttagctgctactgttatcaacaacctcccttacgatgctgaggttcttgtagcattggataagaacgatggctggatga atctgatacctacggacaaaaatggaaagacagtaaaccagaaagtgtcttctaaggtggcacgacttctaaaaattaag agaggttcattgggaattgccttgttccctatcctaccattagacaataccaatttgcaagtgagaatatcagcaaagac acaaaagaatgacgaagatgccgtggaggccaccctgcgagtagatcctccaggaaaacaggttatgaagacgtggcaac ggttagttaaccagaaggaaggggaatcaaataatgatgtcatagacacaagggatcctgaaattatgggctacaatact accaggcttatcattactgctcgaggtgacgtcatcggtccttcgataaatgaggtggcaaataaagtgcccggattata tggcgccaggacggactcagctgatacagaaacggtagtaaagacaattggacccagacttcttctgtctaaatattatg aggcgatgaggatgaagaattacggcaaggacaactatactgaagatcatgaacgtttgttgagtatgcagctccctgat ggatctttcagcagttttggtgcattggacatcagaggaagcacatggatgacagcaactgtgctgaaaatactgaaaga cttgtatagttttggtataacagtcgacgacactgccatcactaaagctacaaactggttggctgagcaacagaaagcag atggctcgtttgaagagaacgggcgcctagtggaaataaatttacagggaggttcaggcgagggacccgttgagctgaca gcgtacgtcactggtatacttgtcgatactccatgcttggtaaacaatatgaagtactgggataatgttgatacacctga ctcagtttggtaccctgttgaggagaagatagaccccattgacctggaaacagcatcgtatgtcttgtcagcacatcgca atgcagggaaactgaaggctgctttacctgtattaagatggataatatctcaacagaggaatggattcagagaaatcagt gatatttctacagagacgcttctgcagcttctgacgttgtattcaggaataggtcaggatattgacacctctatgatgaa ccttgacatccgggtatcaagtcaaactgcaggtcaacctttcacacacaacttcagaattacacctgaaaatactttac ttttgcagtctgtacaagtaccaaaagacgtgaagcaaattcagctgacatcgaggggaccaggtatagctcttgttgag gttgaacattatcacagtgagcctcaggatccccatacaacattagatgtggcattggcgaatgaaacagctatgagcta tactgtggtcatctgcccaaggctttttgttcctacaataggcgataattgggcaagactagaagtagaaatccctgagg gattgacaccttttatagataaaaacaactggaaagtaagaagctcagcatacaacagacatgaaattgcagatggaagg atctatatataccttcaatcacctgatagaagagattcgtgcattccagtgcgttttttccttggcacaaagacgcgaca tattccagcaaaacaaccctccagagttatgctctacacaaagaataataagaataagaagattacaaagttcttccagt ccgccatcggtaaaatgaatacactgtgccaaatgagatgtggtccaaactgcatttgctaa |
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Protein
| Protein ID | pfu_aug2.0_1912.1_08642.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1912.1_08642.t1 MFFYAASQAGDAYSSRAPRPTSSFAGSVDAQAGKDVPTLMKESCYPDKQNNFKEQQGTMRRATAHTERSKNTQKGLNSTH RTVQKHTERSQQHTQNGPKTHRKVTTAHTERSKNTQKGHNSTHETVKNTQRGLNSTHETVKNTQRGLNSTHETVKNTQNS PTTHTGYSYIVTFPRIINKDFNIPISVQILKPVGPVRITASIDNNRNEGSAVEEVGKLPPGQSVGRQFITLDLDVPPFSS HGDDRKKEEFTLTVTGSGGVTFREERKVRMTFSEPTLDILLDKTRYRPGDTVNFLVYGQYPDGSIVRSPYYIHIKVQGND IISIPKSELIEGLGKRSLDYTSLKINADVIEDVTGESVMNDIRTYVESPYNYIDISFDHAGNAVFKPGIPFVTSVQGNDI ISIPKSELIEGLGKRSLDYTSLKINADVIEDVTGESVMNDIRTYVESPYNYIDISFDHAGNAVFKPGIPFVTSVKASKSD KSPLTNLESRMNITASSTTSYSGGMTPFDSQLYDIPMDGVIRLAYTIPKDAKRANLLARYQKTTRSLYMRRAKSKSDNFL KLRLPSTVSTDTLPSVFNAEATEPVDNLFIMIFDDEKLVYNDVISMGGKTKTAVTLPEMKKAESSLSLMGYYVRPDGEVV ADLIEVARGEPTQEKVSLSLDKAEASPGSTMTLSVATPNSSSLVLVHGRDKRLSSMGDDNRFKMSSGGGNNEDDLRDKFP FDAEDAFQKANLFYLSDANIFKYVPKSLCRPPPVEKEPVLILYAKYGLKTSRYQPLITYPNLSALMMEANVRSLGRETWF SDTLITQNGTRVSTDRSYRVPLTYTTWEVSAMSLDKTKQTPSKAELKVTSPFHIRLQLPNSAKAMEPTMLAATVINNLPY DAELKVTSPFHIRLQLPNSAKAMEPTMLAATVINNLPYDAEVLVALDKNDGWMNLIPTDKNGKTVNQKVSSKVARLLKIK RGSLGIALFPILPLDNTNLQVRISAKTQKNDEDAVEATLRVDPPGKQVMKTWQRLVNQKEGESNNDVIDTRDPEIMGYNT TRLIITARGDVIGPSINEVANKVPGLYGARTDSADTETVVKTIGPRLLLSKYYEAMRMKNYGKDNYTEDHERLLSMQLPD GSFSSFGALDIRGSTWMTATVLKILKDLYSFGITVDDTAITKATNWLAEQQKADGSFEENGRLVEINLQGGSGEGPVELT AYVTGILVDTPCLVNNMKYWDNVDTPDSVWYPVEEKIDPIDLETASYVLSAHRNAGKLKAALPVLRWIISQQRNGFREIS DISTETLLQLLTLYSGIGQDIDTSMMNLDIRVSSQTAGQPFTHNFRITPENTLLLQSVQVPKDVKQIQLTSRGPGIALVE VEHYHSEPQDPHTTLDVALANETAMSYTVVICPRLFVPTIGDNWARLEVEIPEGLTPFIDKNNWKVRSSAYNRHEIADGR IYIYLQSPDRRDSCIPVRFFLGTKTRHIPAKQPSRVMLYTKNNKNKKITKFFQSAIGKMNTLCQMRCGPNCIC |
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