Gene
| Gene Model ID | pfu_aug2.0_1912.1_08640 |
|---|---|
| Locus | scaffold1912.1 : 6223 ... 26725 : - |
| To GenomeBrowser | scaffold1912.1:6223..26725 |
| Genes list of scaffold | scaffold1912.1 |
| Synonym | pfu_aug1.0_7686.1_53016 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1912.1_08640.t1 | 6 | 1 | zf-C2H2_jaz | 5 | 27 | 5.2e-11 | 42.3 | 2.3e-07 | 0.00022 | 21.2 |
| pfu_aug2.0_1912.1_08640.t1 | 4 | 1 | zf-Di19 | 5 | 57 | 2.1e-10 | 40.5 | 0.00011 | 0.11 | 12.6 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 1 | zf-H2C2_2 | 5 | 16 | 5.6e-10 | 39.0 | 0.0023 | 2.3 | 8.6 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 1 | zf-C2H2 | 6 | 29 | 1.3e-25 | 88.1 | 6.4e-09 | 6.3e-06 | 26.2 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 1 | zf-C2H2_4 | 6 | 29 | 1.1e-22 | 78.5 | 1.5e-07 | 0.00015 | 21.8 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 1 | zf-met | 6 | 26 | 2.8e-16 | 59.0 | 1.2e-05 | 0.012 | 15.7 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 1 | zf-H2C2_5 | 16 | 29 | 1.6e-07 | 31.0 | 0.23 | 220.0 | 2.3 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 2 | zf-H2C2_2 | 20 | 43 | 5.6e-10 | 39.0 | 4.8e-05 | 0.048 | 13.9 |
| pfu_aug2.0_1912.1_08640.t1 | 4 | 2 | zf-Di19 | 33 | 63 | 2.1e-10 | 40.5 | 0.0022 | 2.1 | 8.5 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 2 | zf-C2H2 | 35 | 57 | 1.3e-25 | 88.1 | 1.1e-05 | 0.011 | 16.0 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 2 | zf-C2H2_4 | 35 | 57 | 1.1e-22 | 78.5 | 2.1e-06 | 0.0021 | 18.2 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 2 | zf-met | 35 | 53 | 2.8e-16 | 59.0 | 0.51 | 500.0 | 1.1 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 2 | zf-H2C2_5 | 35 | 52 | 1.6e-07 | 31.0 | 0.95 | 940.0 | 0.3 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 2 | zf-C2H2_jaz | 36 | 53 | 5.2e-11 | 42.3 | 3.2 | 3200.0 | -1.6 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 3 | zf-H2C2_2 | 154 | 168 | 5.6e-10 | 39.0 | 0.0033 | 3.3 | 8.1 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 3 | zf-C2H2_jaz | 156 | 178 | 5.2e-11 | 42.3 | 3.2e-06 | 0.0032 | 17.5 |
| pfu_aug2.0_1912.1_08640.t1 | 4 | 3 | zf-Di19 | 156 | 208 | 2.1e-10 | 40.5 | 1.3e-05 | 0.013 | 15.5 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 3 | zf-C2H2 | 157 | 180 | 1.3e-25 | 88.1 | 5.2e-08 | 5.1e-05 | 23.3 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 3 | zf-C2H2_4 | 157 | 180 | 1.1e-22 | 78.5 | 5.6e-07 | 0.00056 | 20.0 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 3 | zf-met | 157 | 177 | 2.8e-16 | 59.0 | 5.6e-06 | 0.0055 | 16.8 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 3 | zf-H2C2_5 | 157 | 180 | 1.6e-07 | 31.0 | 1.4e-06 | 0.0014 | 18.7 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 4 | zf-H2C2_2 | 172 | 196 | 5.6e-10 | 39.0 | 8.2e-05 | 0.081 | 13.2 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 4 | zf-C2H2 | 186 | 208 | 1.3e-25 | 88.1 | 1.4e-06 | 0.0014 | 18.8 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 4 | zf-C2H2_4 | 186 | 205 | 1.1e-22 | 78.5 | 3.6e-05 | 0.036 | 14.4 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 4 | zf-met | 186 | 205 | 2.8e-16 | 59.0 | 9.3e-05 | 0.092 | 12.9 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 4 | zf-H2C2_5 | 186 | 209 | 1.6e-07 | 31.0 | 0.00013 | 0.12 | 12.6 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 4 | zf-C2H2_jaz | 187 | 205 | 5.2e-11 | 42.3 | 0.088 | 87.0 | 3.4 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 5 | zf-H2C2_2 | 199 | 209 | 5.6e-10 | 39.0 | 0.32 | 310.0 | 1.9 |
| pfu_aug2.0_1912.1_08640.t1 | 4 | 4 | zf-Di19 | 328 | 380 | 2.1e-10 | 40.5 | 9.2e-07 | 0.00091 | 19.3 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 6 | zf-H2C2_2 | 328 | 339 | 5.6e-10 | 39.0 | 0.00087 | 0.86 | 10.0 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 5 | zf-C2H2 | 329 | 352 | 1.3e-25 | 88.1 | 9.0e-08 | 8.9e-05 | 22.6 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 5 | zf-C2H2_4 | 329 | 352 | 1.1e-22 | 78.5 | 2.8e-07 | 0.00027 | 21.0 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 5 | zf-met | 329 | 349 | 2.8e-16 | 59.0 | 7.5e-05 | 0.075 | 13.2 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 5 | zf-C2H2_jaz | 329 | 350 | 5.2e-11 | 42.3 | 4.0e-07 | 0.00039 | 20.4 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 5 | zf-H2C2_5 | 330 | 352 | 1.6e-07 | 31.0 | 2.6e-06 | 0.0026 | 17.8 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 7 | zf-H2C2_2 | 344 | 367 | 5.6e-10 | 39.0 | 9.8e-05 | 0.097 | 13.0 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 6 | zf-C2H2 | 358 | 380 | 1.3e-25 | 88.1 | 0.0014 | 1.4 | 9.3 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 6 | zf-met | 358 | 377 | 2.8e-16 | 59.0 | 0.00013 | 0.13 | 12.5 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 6 | zf-H2C2_5 | 358 | 380 | 1.6e-07 | 31.0 | 0.084 | 83.0 | 3.7 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 6 | zf-C2H2_4 | 359 | 377 | 1.1e-22 | 78.5 | 0.0017 | 1.7 | 9.1 |
| pfu_aug2.0_1912.1_08640.t1 | 6 | 6 | zf-C2H2_jaz | 359 | 377 | 5.2e-11 | 42.3 | 1.5 | 1500.0 | -0.5 |
| pfu_aug2.0_1912.1_08640.t1 | 8 | 8 | zf-H2C2_2 | 372 | 381 | 5.6e-10 | 39.0 | 0.75 | 750.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1912.1_08640.t1 | gi|676478584|ref|XP_009061475.1| | hypothetical protein LOTGIDRAFT_127178, partial [Lottia gigantea] | 2.0e-15 |
| pfu_aug2.0_1912.1_08640.t1 | gi|8394006|ref|NP_059060.1| | zinc finger protein 260 [Rattus norvegicus] | 1.0e-14 |
| pfu_aug2.0_1912.1_08640.t1 | gi|672035849|ref|XP_008757405.1| | PREDICTED: zinc finger protein 260 isoform X1 [Rattus norvegicus] | 2.0e-14 |
| pfu_aug2.0_1912.1_08640.t1 | gi|658844481|ref|XP_008404654.1| | PREDICTED: zinc finger protein 883-like [Poecilia reticulata] | 1.0e-13 |
| pfu_aug2.0_1912.1_08640.t1 | gi|675760502|ref|XP_008986073.1| | PREDICTED: zinc finger protein 260 [Callithrix jacchus] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_1912.1_08640.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1912.1_08640.t1 atggcacctgctaaatttgaatgcgtaatttgcggcaaatcatttactaaacgcaatagcttaaatcgtcatatccggac gattcatcatagggagtccaccaaatgtgaattttgcggacatactttccctcgaaaagacagttatcttcgccatgtaa tatcacaacaccaacggggtagtggacaagttcgaggagagagcaagacattcaacaaagcaaaggaaaataaatatgaa gagaaatcgcaaccacaaaccgatttttctccctttcaaaacgacaaagaaaaggagtgtgctagtaacgaggaggagaa ggagcaggagcaggagaacgtcaatggaaatttgagaacatttccaaaagatgaaaatggtcaccgttcaaggcagaaac aatatgaaactaggcggcagatattttcagggtctaaaagttcaatatcggcgaaggcaccttctaagtataaatgcgaa ctttgtggcacgtatttcaccagacagagtgttttagatcgtcatgttcggacggtccatgatgggatgtccaccaagtg tgagctttgtgaacagacttttagccgaaaagacaattatctgcgacatttaaaattgaaacatccgcaggatggcggac ttgtacgggaagagagtgagaaatccaacagaacgaatgcaaatgacaacgaagtgaaattgcaaacagataatcatgtt tcatcagaaattgatttcttatcaaacaaaacaaataatgtaaccaaaatggaaaaaccactcccagtcaaaggacattc tgacccggataatgaggaagtgctcaaaggtataacggaggatgaagtggagaacatcaacgaaaatttgagaacttatt ccgaagacgaaaatggtcagcggtgtgtgcaaaatcaatgtgagtctaggctgcaaatatcatcggggttaacaagtcaa ctatcagcgaccgcacctgctgaatttgaatgcgaattttgtggcaagtatttcacaaaacgcaaagttttaaatcgtca tattcggacggtccatgaggggaagtcgaccacatgtgaaatatgctgtctttccttcagccgtaaagacagttatcttc ggcatctaaaatttaaacatcaacaggatgatggacttgtacgggaagagagtacagacaaagcaaacaaagtaaatgca aatgacaacgaagagaaatcggaaacagaaaaatatgattcctcagaaaatgatttagaaatggaatgtatttcggagga ggaggaagaggaggagaaggaggacatcaacgaaaattttgggaactattcaatagaagaaaatggcaagtcattatttc aatattga |
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Protein
| Protein ID | pfu_aug2.0_1912.1_08640.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1912.1_08640.t1 MAPAKFECVICGKSFTKRNSLNRHIRTIHHRESTKCEFCGHTFPRKDSYLRHVISQHQRGSGQVRGESKTFNKAKENKYE EKSQPQTDFSPFQNDKEKECASNEEEKEQEQENVNGNLRTFPKDENGHRSRQKQYETRRQIFSGSKSSISAKAPSKYKCE LCGTYFTRQSVLDRHVRTVHDGMSTKCELCEQTFSRKDNYLRHLKLKHPQDGGLVREESEKSNRTNANDNEVKLQTDNHV SSEIDFLSNKTNNVTKMEKPLPVKGHSDPDNEEVLKGITEDEVENINENLRTYSEDENGQRCVQNQCESRLQISSGLTSQ LSATAPAEFECEFCGKYFTKRKVLNRHIRTVHEGKSTTCEICCLSFSRKDSYLRHLKFKHQQDDGLVREESTDKANKVNA NDNEEKSETEKYDSSENDLEMECISEEEEEEEKEDINENFGNYSIEENGKSLFQY |
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