Gene
| Gene Model ID | pfu_aug2.0_1871.1_05285 |
|---|---|
| Locus | scaffold1871.1 : 37322 ... 45775 : - |
| To GenomeBrowser | scaffold1871.1:37322..45775 |
| Genes list of scaffold | scaffold1871.1 |
| Synonym | pfu_aug1.0_1080.1_00598 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein phosphatase pp1-beta catalytic subunit-like | GO:0004722 GO:0005737 GO:0005925 GO:0006470 GO:0019901 GO:0030155 GO:0032922 GO:0043153 GO:0050115 GO:0070062 GO:0070688 GO:0072357 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1871.1_05285.t1 | 1 | 1 | Metallophos | 45 | 236 | 2.94273e-44 | 150.8 | 0.0 | 3.64338e-44 | 150.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1871.1_05285.t1 | gi|524893878|ref|XP_005103447.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1871.1_05285.t1 | gi|676471635|ref|XP_009059237.1| | hypothetical protein LOTGIDRAFT_192316 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1871.1_05285.t1 | gi|291222498|ref|XP_002731251.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1871.1_05285.t1 | gi|524990665|ref|XP_005043208.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X2 [Ficedula albicollis] | 0.0 |
| pfu_aug2.0_1871.1_05285.t1 | gi|551493636|ref|XP_005798386.1| | PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit-like isoform X2 [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1871.1_05285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1871.1_05285.t1 atgtttgcagcagtaagaggatgtcggccagggaaaacggtgcagatgacagaggcagaagtacgaggattatgtcttaa atccagagaaatattcctcagtcaaccaattctactggaactagaagctcctcttaagatatgtggtgatattcatggac agtacacagatctcctacgactgtttgagtacgggggtttccctcctgaatccaactacttattccttggtgattatgta gacagaggaaaacaatctctagaaacaatttgtctgcttctagcatacaaaatcaaatatccagaaaatttcttcttatt gcgagggaatcacgaatgtgccagcatcaataggatttatggtttttacgatgaatgtaaaagaagatacaacgtgaagt tatggaagacatttacagattgttttaactgtttacctatagccgctatcatcgatgagaagatattctgttgtcatgga ggtttatcaccagatctacagtccatggaacagattaggagaataatgaggcccacagatgtaccagatacaggcttgtt atgtgatttactgtggtccgatcctgacaaagaagtacagggatggggagagaacgatcgaggcgtgtcatttacgtttg gagcggatgttgtcagtaaattccttaacagacatgatctagatcttatatgtcgagcacatcaggttgtggaggatggc tatgaattttttgccaaacgacagcttgtcacattgttctcagcacctaattactgtggggagtttgacaatgctggggg gatgatgtcagtggatgaaacattaatgtgctcgtttcagatcttaaaaccatcagaaaagaaagcaaaatatcagtatg gtggccttaattctggcagaccagtgactccacctagaggaccgcagcaaaagaaaagatga |
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Protein
| Protein ID | pfu_aug2.0_1871.1_05285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1871.1_05285.t1 MFAAVRGCRPGKTVQMTEAEVRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPESNYLFLGDYV DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLWKTFTDCFNCLPIAAIIDEKIFCCHG GLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKEVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDG YEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRGPQQKKR |
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