Gene
| Gene Model ID | pfu_aug2.0_1835.1_18562 |
|---|---|
| Locus | scaffold1835.1 : 100168 ... 114525 : - |
| To GenomeBrowser | scaffold1835.1:100168..114525 |
| Genes list of scaffold | scaffold1835.1 |
| Synonym | pfu_aug1.0_5338.1_09095 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1835.1_18562.t1 | 2 | 1 | SEFIR | 68 | 128 | 4.8e-10 | 39.6 | 7.3e-07 | 0.011 | 15.8 |
| pfu_aug2.0_1835.1_18562.t1 | 2 | 2 | SEFIR | 182 | 267 | 4.8e-10 | 39.6 | 1.0e-08 | 0.00015 | 21.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1835.1_18562.t1 | gi|676466629|ref|XP_009057626.1| | hypothetical protein LOTGIDRAFT_233367 [Lottia gigantea] | 2.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1835.1_18562.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1835.1_18562.t1 atgataattctggaggacttcttaaagcggcagaacaattcagtccgtgtactgcgtgatgccctgctgtccatcgaccg cgatgatgctttacgtgttttattagacgctcttccagtgacgtattgtttcaccgagtttcaaaaaaaaaaagaaagaa agaaaagaaaaagaatgcctgtaacagtagccaggcctttgaaagcgttcgtgactttcgcctgtgattctgatcagcac ctccgtatggtggtcaacatgacgttatgtctggagaggaacggagcacgagctgccatggatatgttccactacactat gccgactgatgacaaaataggatggatccgaaggatgtacgcagaggctgaggtgatcatgctttatattattctacatc acctgttctatatctgttactattccaggctgaggtatttctccacattttcttatctatttctgttactattccaggct gaggtgatcatgctttatatttctccacattacctgatcttccaggctgaggtgatcatggctgaggtgatcatggtttg tatttctccacaatatctgatccaggctgaccctctgatgacaaatgtgacggtgaacggtaacggtctccacacgtcac ttatctaccgtatgatccggagggagattgaggtgacgggcacctgtcggaggtttatatgtgtgatggtaggggacgac accacacctgaggacatacctgtcctactgaggggctgtcccaccttcctatggcctgcacagtatggttcagtcctgtc ctatctactgatgccaaacaccagaccccagataagattcatgagtgaaatggacggactcaaaacatacactcagttat ga |
|
Protein
| Protein ID | pfu_aug2.0_1835.1_18562.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1835.1_18562.t1 MIILEDFLKRQNNSVRVLRDALLSIDRDDALRVLLDALPVTYCFTEFQKKKERKKRKRMPVTVARPLKAFVTFACDSDQH LRMVVNMTLCLERNGARAAMDMFHYTMPTDDKIGWIRRMYAEAEVIMLYIILHHLFYICYYSRLRYFSTFSYLFLLLFQA EVIMLYISPHYLIFQAEVIMAEVIMVCISPQYLIQADPLMTNVTVNGNGLHTSLIYRMIRREIEVTGTCRRFICVMVGDD TTPEDIPVLLRGCPTFLWPAQYGSVLSYLLMPNTRPQIRFMSEMDGLKTYTQL |
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