Gene
| Gene Model ID | pfu_aug2.0_182.1_07118 |
|---|---|
| Locus | scaffold182.1 : 199245 ... 204889 : + |
| To GenomeBrowser | scaffold182.1:199245..204889 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | pfu_aug1.0_30082.1_26507 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cysteine-rich ku venom protein isoform x1 | GO:0009987 GO:0048731 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07118.t2 | 4 | 1 | TSP_1 | 26 | 71 | 2.8e-29 | 100.9 | 8.7e-14 | 4.3e-10 | 39.5 |
| pfu_aug2.0_182.1_07118.t2 | 4 | 2 | TSP_1 | 109 | 156 | 2.8e-29 | 100.9 | 4.3e-14 | 2.1e-10 | 40.5 |
| pfu_aug2.0_182.1_07118.t2 | 4 | 3 | TSP_1 | 219 | 227 | 2.8e-29 | 100.9 | 3.0 | 15000.0 | -4.0 |
| pfu_aug2.0_182.1_07118.t2 | 4 | 4 | TSP_1 | 255 | 303 | 2.8e-29 | 100.9 | 8.0e-15 | 4.0e-11 | 42.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_182.1_07118.t2 | gi|268562573|ref|XP_002646694.1| | C. briggsae CBR-SPON-1 protein [Caenorhabditis briggsae] | 4.0e-23 |
| pfu_aug2.0_182.1_07118.t2 | gi|32564253|ref|NP_495473.2| | SPON-1 [Caenorhabditis elegans] | 2.0e-22 |
| pfu_aug2.0_182.1_07118.t2 | gi|665785950|ref|XP_008549937.1| | PREDICTED: spondin-1 [Microplitis demolitor] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07118.t1 atgctactgatacctagagtcatgacatcagctgcagaatatttggccagaaaaatggaaaaatgcgcaactggcgactg gacgctatggacggactgcagcaatccttgcggcaatggtcagcaagaacggaggagggtattgaaaaatccccagatct tacctgaaacttgtggggtagatctgaaagaaactaagcaatgtagaggcgattgttcaagtcgatccaggacgagaaaa ccgggaaaaggcaaggggctgagggacgactttgttgtgcgcattgatacaacaatttccaacggcagcgacatctgcgc aataacgccatggtctgattggtcgccttgctctgtcacgtgcggcatgggccttacggaaagatggcggatgtttctaa caaaatcagaccagactaaaaaatgtggcttgcaattaatggaaagggacatttgtgtcaactctgtgcaaaattgcaga gatgctctaacgcagaaaaattttacagccatttgtcttgatccgcctgatgtggggccttgtcggggaaactttccacg ttggtactataactccagccttgatacttgcatggtcttttcttatggtggttgccgtggaaacgaaaataaatttgata atgagaagcagtgcaacactcattgcacagaacatttcgcgagccttaaagctcataatgaagtcatagacgccaatttt gatacaattgaagtgaagatgaagtcacgtataggtatggacggacgggacgaccccaccgcccatctaaatatagataa actcaataaaatgaaacaaaagataaagagaaaaaagaaccggaagaacaaaaagaggaagaggctccggaagttgcgca gacgtggtaaatatgatccaagtaaaggaccacgtgttgactgtgtgataacaagttggtctgagtggtcgccgtgctcc gtgtcttgtggtagaggatttatttcaaagacaaggacggtcaaagttcaagggtcaaatgggggtattcgttgtccgag gaagttgatgaaaaagaagaagtgtaaaatggagaaatgtcagttattgaaaatggaatga |
|
| Transcript ID | pfu_aug2.0_182.1_07118.t2 |
| Definition | - |
>pfu_aug2.0_182.1_07118.t2 atgctactgatacctagagtcatgacatcagctgcagaatatttggccagaaaaatggaaaaatgcgcaactggcgactg gacgctatggacggactgcagcaatccttgcggcaatggtcagcaagaacggaggagggtattgaaaaatccccagatct tacctgaaacttgtggggtagatctgaaagaaactaagcaatgtagaggcgattgttcaagtcgatccaggacgagaaaa ccgggaaaaggcaaggggctgagggacgactttgttgtgcgcattgatacaacaatttccaacggcagcgacatctgcgc aataacgccatggtctgattggtcgccttgctctgtcacgtgcggcatgggccttacggaaagatggcggatgtttctaa caaaatcagaccagactaaaaaatgtggcttgcaattaatggaaagggacatttgtgtcaactctgtgcaaaattgcaga gatgctctaacgcagaaaaattttacagcgagccttaaagctcataatgaagtcatagacgccaattttgatacaattga agtgaagatgaagtcacgtataggtatggacggacgggacgaccccaccgcccatctaaatatagataaactcaataaaa tgaaacaaaagataaagagaaaaaagaaccggaagaacaaaaagaggaagaggctccggaagttgcgcagacgtggtaaa tatgatccaagtaaaggaccacgtgttgactgtgtgataacaagttggtctgagtggtcgccgtgctccgtgtcttgtgg tagaggatttatttcaaagacaaggacggtcaaagttcaagggtcaaatgggggtattcgttgtccgaggaagttgatga aaaagaagaagtgtaaaatggagaaatgtcagttattgaaaatggaatga |
|
Protein
| Protein ID | pfu_aug2.0_182.1_07118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07118.t1 MLLIPRVMTSAAEYLARKMEKCATGDWTLWTDCSNPCGNGQQERRRVLKNPQILPETCGVDLKETKQCRGDCSSRSRTRK PGKGKGLRDDFVVRIDTTISNGSDICAITPWSDWSPCSVTCGMGLTERWRMFLTKSDQTKKCGLQLMERDICVNSVQNCR DALTQKNFTAICLDPPDVGPCRGNFPRWYYNSSLDTCMVFSYGGCRGNENKFDNEKQCNTHCTEHFASLKAHNEVIDANF DTIEVKMKSRIGMDGRDDPTAHLNIDKLNKMKQKIKRKKNRKNKKRKRLRKLRRRGKYDPSKGPRVDCVITSWSEWSPCS VSCGRGFISKTRTVKVQGSNGGIRCPRKLMKKKKCKMEKCQLLKME |
|
| Protein ID | pfu_aug2.0_182.1_07118.t2 |
| Definition | - |
>pfu_aug2.0_182.1_07118.t2 MLLIPRVMTSAAEYLARKMEKCATGDWTLWTDCSNPCGNGQQERRRVLKNPQILPETCGVDLKETKQCRGDCSSRSRTRK PGKGKGLRDDFVVRIDTTISNGSDICAITPWSDWSPCSVTCGMGLTERWRMFLTKSDQTKKCGLQLMERDICVNSVQNCR DALTQKNFTASLKAHNEVIDANFDTIEVKMKSRIGMDGRDDPTAHLNIDKLNKMKQKIKRKKNRKNKKRKRLRKLRRRGK YDPSKGPRVDCVITSWSEWSPCSVSCGRGFISKTRTVKVQGSNGGIRCPRKLMKKKKCKMEKCQLLKME |
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