Gene
| Gene Model ID | pfu_aug2.0_182.1_07117 |
|---|---|
| Locus | scaffold182.1 : 190625 ... 199137 : + |
| To GenomeBrowser | scaffold182.1:190625..199137 |
| Genes list of scaffold | scaffold182.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_182.1_07117.t1 | 1 | 1 | Spond_N | 42 | 131 | 2.3e-24 | 86.2 | 1.8e-28 | 2.7e-24 | 85.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_182.1_07117.t1 | gi|676457253|ref|XP_009054589.1| | hypothetical protein LOTGIDRAFT_117765, partial [Lottia gigantea] | 4.0e-27 |
| pfu_aug2.0_182.1_07117.t1 | gi|241705268|ref|XP_002413250.1| | F-spondin, putative [Ixodes scapularis] | 2.0e-24 |
| pfu_aug2.0_182.1_07117.t1 | gi|391342368|ref|XP_003745492.1| | PREDICTED: spondin-1-like [Metaseiulus occidentalis] | 2.0e-24 |
| pfu_aug2.0_182.1_07117.t1 | gi|498949656|ref|XP_004522888.1| | PREDICTED: spondin-1 [Ceratitis capitata] | 6.0e-23 |
| pfu_aug2.0_182.1_07117.t1 | gi|498949669|ref|XP_004522890.1| | 7.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_182.1_07117.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07117.t1 atgcaaacaggcaagaaggataccgtaaatcccctgaatagaaatgggaaaccattaggaacaccgctaggggacggcac tggtgtcaatgtggctccacctcccggatgttgcgcatgcggagaagcccggtacaaagttcacttccagggaatgtggt cccgacacacccatcccaagggcttccctatcgacatcagagataaagttagacttcattggtcaagtttggttggggca tcccattctagggactataccatttgggcctacgacagtctagcctcgaggggtgtgaaggaggtctgcgaatatgggta ttccaacaacctggaggcagaattcaaacgacacagtaaaagcataaagacggtagtaaagacacgccccctttggggag aggntcgacttgtacccatgggacgcgggtacagacagtggtataacctactttgatcagaatatagagactgtcccaag ggagaagattcacaggataaccaatag |
|
Protein
| Protein ID | pfu_aug2.0_182.1_07117.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_182.1_07117.t1 MQTGKKDTVNPLNRNGKPLGTPLGDGTGVNVAPPPGCCACGEARYKVHFQGMWSRHTHPKGFPIDIRDKVRLHWSSLVGA SHSRDYTIWAYDSLASRGVKEVCEYGYSNNLEAEFKRHSKSIKTVVKTRPLWGEXRLVPMGRGYRQWYNLLXSEYRDCPK GEDSQDNQ |
|